RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RSPRY1Q96DX4 576 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 RBM18Q96H35 190 aaKnown RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 ZNF486Q96H40 463 aaPredicted RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 ZNF582Q96NG8 517 aaPredicted RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 HHATLQ9HCP6 504 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 RANGRFQ9HD47 186 aaPredicted RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 CNOT2Q9NZN8 540 aaKnown RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 KLK4Q9Y5K2 254 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 MEIOCA2RUB1 952 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 PRKNO60260 465 aaPredicted RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 HLA-DQA2P01906 255 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 ZNF10P21506 573 aaPredicted RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 ACADLP28330 430 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 VSX2P58304 361 aaPredicted RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 E2F2Q14209 437 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 SSX1Q16384 188 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 CXXC5Q7LFL8 322 aaKnown RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 GNPDA2Q8TDQ7 276 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 TMEM255BQ8WV15 326 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 LMAN2LQ9H0V9 348 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 HSPB11Q9Y547 144 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 PATJQ8NI35 1801 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 SSNA1O43805 119 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 MVDP53602 400 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 SHC2P98077 582 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 IZUMO1Q8IYV9 350 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 OR2T33Q8NG76 320 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 SLC41A3Q96GZ6 507 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 LRIT2A6NDA9 550 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 DUXAA6NLW8 204 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 COQ9O75208 318 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 SCG5P05408 212 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 AGAP6Q5VW22 663 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 PROKR2Q8NFJ6 384 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 AGAP4Q96P64 663 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 FYTTD1Q96QD9 318 aaKnown RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 C6orf106Q9H6K1 298 aaPredicted RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 CALML5Q9NZT1 146 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 NDRG2Q9UN36 371 aaKnown RBP14.93□□□□□ -0.02
SMAD6-201ENST00000288840 SCN5AQ14524 2016 aa14.93□□□□□ -0.02
SMAD6-201ENST00000288840 TRAV27A0A087WT01 109 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 URADA6NGE7 173 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 MAGEB4O15481 346 aaPredicted RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 CHST10O43529 356 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 DRD2P14416 443 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ALAS2P22557 587 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ATP5A1P25705 553 aaKnown RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ILF3Q12906 894 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 DSG2Q14126 1118 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 MEDAGQ5VYS4 303 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 TSEN54Q7Z6J9 526 aaKnown RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 LUZP2Q86TE4 346 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 BBS1Q8NFJ9 593 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 PATE1Q8WXA2 126 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 C17orf113A0A1B0GUU1 675 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 EEF1E1O43324 174 aaKnown RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 PROM1O43490 865 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 MOSPD3O75425 235 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 HBQ1P09105 142 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 NAT1P18440 290 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ARL4DP49703 201 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 PDX1P52945 283 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ZNHIT3Q15649 155 aaPredicted RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 NDUFA9Q16795 377 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ZNF776Q68DI1 518 aaPredicted RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 NRROSQ86YC3 692 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 LINC01555Q8NAE3 123 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 FANK1Q8TC84 345 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 CNRIP1Q96F85 164 aaPredicted RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 SEMA4GQ9NTN9 838 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 SMLR1H3BR10 107 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 MINDY4Q4G0A6 757 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 METRNLQ641Q3 311 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ZNF793Q6ZN11 406 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 FBXO15Q8NCQ5 510 aaPredicted RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 OSTF1Q92882 214 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 CHIAQ9BZP6 476 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ATP13A2Q9NQ11 1180 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 PAK6Q9NQU5 681 aaPredicted RBP14.92□□□□□ -0.02
SMAD6-201ENST00000288840 HRASLS2Q9NWW9 162 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 ING3Q9NXR8 418 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 SCN4AP35499 1836 aa14.92□□□□□ -0.02
SMAD6-201ENST00000288840 PRODHO43272 600 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 HRO43593 1189 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 HNRNPA1P09651 372 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 NDUFV2P19404 249 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 S100A1P23297 94 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 TRIM23P36406 574 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 CTBP2P56545 445 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 PRKCDQ05655 676 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 SUZ12Q15022 739 aaKnown RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 SLX4IPQ5VYV7 408 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 SAXO2Q658L1 398 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 ASPGQ86U10 573 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 PLPP6Q8IY26 295 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 TMIEQ8NEW7 156 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 OR2L5Q8NG80 312 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 OR8H1Q8NGG4 311 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms