RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PYDC2Q56P42 97 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 PRRT3Q5FWE3 981 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 LCN1P1Q5VSP4 162 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 FAM26EQ8N5C1 309 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 GPR174Q9BXC1 333 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 ANKRA2Q9H9E1 313 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 A4GALTQ9NPC4 353 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 USP36Q9P275 1121 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 CCDC88CQ9P219 2028 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 A6NCN8 305 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 STK25O00506 426 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 PLA2G10O15496 165 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 HCN1O60741 890 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 IGFBP1P08833 259 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 MANFP55145 182 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 C19orf57Q0VDD7 668 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 GAS6Q14393 721 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 PAQR6Q6TCH4 344 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 DEFB119Q8N690 84 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 UBASH3BQ8TF42 649 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 MS4A6EQ96DS6 147 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 POLDIP3Q9BY77 421 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 A0A0A6YYD5 115 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 A0A1W2PS29 197 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 B4GALT2O60909 372 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 HLA-DQB1P01920 261 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 ALPPL2P10696 532 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 GPC1P35052 558 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 SMIM11AP58511 58 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 ZNF750Q32MQ0 723 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 ZNF628Q5EBL2 1059 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 NDUFAF5Q5TEU4 345 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 C22orf42Q6IC83 251 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 TCTN3Q6NUS6 607 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 PGBD2Q6P3X8 592 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 CEACAM20Q6UY09 585 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 WDR53Q7Z5U6 358 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 ZNF761Q86XN6 746 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 OR52I1Q8NGK6 324 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 OR10G6Q8NH81 332 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 ZC3HAV1LQ96H79 300 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 PHF7Q9BWX1 381 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 PRO3102Q9H379 93 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 SRMSQ9H3Y6 488 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 DDX31Q9H8H2 851 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 WDR70Q9NW82 654 aa17.16■□□□□ 0.34
PDLIM3-201ENST00000284767 PDPK1O15530 556 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 PROM1O43490 865 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 F3P13726 295 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 FAPQ12884 760 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 ZIC1Q15915 447 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 PLK5Q496M5 336 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 TNFAIP8L2Q6P589 184 aaPredicted RBP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 PLCZ1Q86YW0 608 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 GPR32P1Q8NGA4 272 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 APOBEC3BQ9UH17 382 aaKnown RBP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 OR6C70A6NIJ9 312 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 CLEC2LP0C7M8 214 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 C1orf61Q13536 156 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 GPR18Q14330 331 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 GPR19Q15760 415 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 PLET1Q6UQ28 207 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 LAPTM4BQ86VI4 370 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 CAMKK1Q8N5S9 505 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 KCT2Q8NC54 265 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 SLC38A5Q8WUX1 472 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 GAS2L1Q99501 681 aaPredicted RBP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 TRAF4Q9BUZ4 470 aaPredicted RBP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 NIPAL2Q9H841 368 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 TESQ9UGI8 421 aaKnown RBP17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 FBXW2Q9UKT8 454 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 ATG4BQ9Y4P1 393 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 HEBP2Q9Y5Z4 205 aa17.15■□□□□ 0.34
PDLIM3-201ENST00000284767 CSF2P04141 144 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 BCHEP06276 602 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 FHP07954 510 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 POLR2CP19387 275 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 CERS1P27544 350 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 CMPK1P30085 196 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 PPP3R1P63098 170 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 RPS26P11Q5JNZ5 115 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 C3orf38Q5JPI3 329 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF425Q6IV72 752 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 TRIM48Q8IWZ4 208 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 NEURL3Q96EH8 262 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 FUZQ9BT04 418 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 BEX2Q9BXY8 128 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 PITHD1Q9GZP4 211 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ISYNA1Q9NPH2 558 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 OR6C2Q9NZP2 312 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ACAD8Q9UKU7 415 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SPIN1Q9Y657 262 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SDK1Q7Z5N4 2213 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 PGRMC2O15173 223 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ARHGEF9O43307 516 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SEMA7AO75326 666 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms