RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 KIR2DL3P43628 341 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TSFMP43897 325 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 IL17AQ16552 155 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 YOD1Q5VVQ6 348 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PIGWQ7Z7B1 504 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TMEM173Q86WV6 379 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SCAMP4Q969E2 229 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CDK15Q96Q40 435 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 RBM24Q9BX46 236 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NIPAL2Q9H841 368 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 AGPAT4Q9NRZ5 378 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CA14Q9ULX7 337 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SLC6A5Q9Y345 797 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CMAHPQ9Y471 501 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LRP5LA4QPB2 252 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 KLRC4-KLRK1H3BQV0 150 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GABBR2O75899 941 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CDRT1O95170 752 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TIMP1P01033 207 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CFHP08603 1231 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CD38P28907 300 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NR4A2P43354 598 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 VEGFCP49767 419 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 BLOC1S1P78537 153 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SUSD1Q6UWL2 747 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 DPPA4Q7L190 304 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CEACAM19Q7Z692 300 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SGPP2Q8IWX5 399 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CMIPQ8IY22 773 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 KLHDC8AQ8IYD2 350 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PIAS4Q8N2W9 510 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 STEAP2Q8NFT2 490 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 OR4K5Q8NGD3 323 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CLEC4CQ8WTT0 213 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TIMM29Q9BSF4 260 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 HAO2Q9NYQ3 351 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ERVK-19Q9WJR5 959 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 B3GNT3Q9Y2A9 372 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ATG4BQ9Y4P1 393 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 IGLON5A6NGN9 336 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SCAMP2O15127 329 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 BCAT2O15382 392 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 HTRA2O43464 458 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZFAND5O76080 213 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 FDXRP22570 491 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SOX2P48431 317 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LGALS4P56470 323 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TAS2R46P59540 309 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 IRF9Q00978 393 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SLC25A11Q02978 314 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NPRL3Q12980 569 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SLAMF1Q13291 335 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 KCNJ8Q15842 424 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GPR157Q5UAW9 335 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CARD17Q5XLA6 110 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 OR4C11Q6IEV9 310 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 USP53Q70EK8 1073 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZBTB46Q86UZ6 589 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MISPQ8IVT2 679 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZFAND1Q8TCF1 268 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GPR148Q8TDV2 347 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TAAR8Q969N4 342 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ECHDC3Q96DC8 303 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 DAZAP1Q96EP5 407 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TSNAXQ99598 290 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MICU1Q9BPX6 476 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 RBCK1Q9BYM8 510 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ABCG5Q9H222 651 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 COQ10BQ9H8M1 238 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NANOGQ9H9S0 305 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 FOLH1BQ9HBA9 442 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF160Q9HCG1 818 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GNG12Q9UBI6 72 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SARDHQ9UL12 918 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 DIDO1Q9BTC0 2240 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 J3KR12 359 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 P2RX6O15547 441 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MRPS14O60783 128 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TSPAN15O95858 294 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PAK4O96013 591 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CKMT1AP12532 417 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CD1DP15813 335 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MAGP20916 626 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PRPH2P23942 346 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GDF1P27539 372 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MTNR1AP48039 350 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LUMP51884 338 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SRYQ05066 204 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 DCAF12Q5T6F0 453 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TMEM244Q5VVB8 128 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 KANK2Q63ZY3 851 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 WBP2NLQ6ICG8 309 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 FIGLAQ6QHK4 219 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PWWP2AQ96N64 755 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ARNT2Q9HBZ2 717 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TAS2R3Q9NYW6 316 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LRFN1Q9P244 771 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PCTPQ9UKL6 214 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 REXO2Q9Y3B8 237 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 HSPB11Q9Y547 144 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms