RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MAMSTRQ6ZN01 415 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF836Q6ZNA1 936 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 PTCHD4Q6ZW05 846 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 VWA5B2Q8N398 1253 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 COX18Q8N8Q8 333 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 OR52R1Q8NGF1 315 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 PMM1Q92871 262 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MMABQ96EY8 250 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 RBM18Q96H35 190 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AHCYL2Q96HN2 611 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MCHR1Q99705 422 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 COPS4Q9BT78 406 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 FUNDC2Q9BWH2 189 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 RBCK1Q9BYM8 510 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AMBNQ9NP70 447 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ACOT13Q9NPJ3 140 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 IRAK4Q9NWZ3 460 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 KLHL3Q9UH77 587 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 NDOR1Q9UHB4 597 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 THADAQ6YHU6 1953 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SH3D21A4FU49 640 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CLDN24A6NM45 220 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CPSF4LA6NMK7 179 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 H3BN98 237 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 M0R129 80 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 HRO43593 1189 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 NUDT21O43809 227 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 NOL3O60936 208 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 COQ9O75208 318 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 SOX14O95416 240 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CDK1P06493 297 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 DBIP07108 87 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 RPS4Y1P22090 263 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 IFNA8P32881 189 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 EMP3P54852 163 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 SNRPGP62308 76 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 HOXC5Q00444 222 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 MVKQ03426 396 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CFHR1Q03591 330 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 STX4Q12846 297 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 DYNC1I2Q13409 638 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GRM7Q14831 915 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 C12orf73Q69YU5 71 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 FIGNL1Q6PIW4 674 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 DEFB123Q8N688 67 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 OR51Q1Q8NH59 317 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GNPDA2Q8TDQ7 276 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 RAB2BQ8WUD1 216 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 RIT1Q92963 219 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GPA33Q99795 319 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 IER2Q9BTL4 223 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 ANKRD19PQ9H560 264 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GPN2Q9H9Y4 310 aaPredicted RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CLN6Q9NWW5 311 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 WARS2Q9UGM6 360 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 KCNE5Q9UJ90 142 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 NTNG1Q9Y2I2 539 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 TMEM184BQ9Y519 407 aaPredicted RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CLDN16Q9Y5I7 305 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 EML5Q05BV3 1969 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CENPVL1A0A0U1RR11 272 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 A0A1W2PPW3 197 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 H0YIG0 161 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 H3BMH7 237 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 MAN1A2O60476 641 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 OR5F1O95221 314 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 FADS2O95864 444 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GLB1P16278 677 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 TNNI3P19429 210 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CCNA2P20248 432 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GSTM3P21266 225 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CD1CP29017 333 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 HOXA6P31267 233 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 IFNGR2P38484 337 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GPR3P46089 330 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GIPRP48546 466 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 EMDP50402 254 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF136P52737 540 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 NUDT6P53370 316 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 SHBQ15464 509 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 DECR1Q16698 335 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 EIPR1Q53HC9 387 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 TSSK4Q6SA08 328 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CCDC81Q6ZN84 652 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GDF7Q7Z4P5 450 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 GALNT12Q8IXK2 581 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 SLC35F3Q8IY50 421 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 CARFQ8N187 725 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 TRUB1Q8WWH5 349 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 YIPF6Q96EC8 236 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 LMF2Q9BU23 707 aaKnown RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 FOLH1BQ9HBA9 442 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 C11orf16Q9NQ32 467 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 POLE3Q9NRF9 147 aa8.92□□□□□ -0.98
TRIM55-201ENST00000276573 HEMK1Q9Y5R4 338 aaPredicted RBP8.92□□□□□ -0.98
TRIM55-201ENST00000276573 PCDH15Q96QU1 1955 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 CCDC163A0A0D9SF12 145 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms