RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 METTL27Q8N6F8 245 aaPredicted RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 UBASH3BQ8TF42 649 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 CLIP3Q96DZ5 547 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 MND1Q9BWT6 205 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 TXNL4BQ9NX01 149 aaKnown RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 ZNF624Q9P2J8 865 aaPredicted RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 WDR45Q9Y484 360 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 DOCK8Q8NF50 2099 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 PRSS38A1L453 326 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 SH3D21A4FU49 640 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 CDC42EP2O14613 210 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 CASKO14936 926 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 ASNA1O43681 348 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 NR2F6P10588 404 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 IMPDH2P12268 514 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 SHHQ15465 462 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 ITPRIPL2Q3MIP1 535 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 AGAP7PQ5VUJ5 663 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 ANKRD54Q6NXT1 300 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 VN1R4Q7Z5H5 301 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 SDHCQ99643 169 aaPredicted RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 C3orf14Q9HBI5 128 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 USP36Q9P275 1121 aaKnown RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 CHST2Q9Y4C5 530 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 F3P13726 295 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 UGT2B10P36537 528 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 MTNR1AP48039 350 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 ERV3-1Q14264 604 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 PYDC2Q56P42 97 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 NECTIN4Q96NY8 510 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 BCL7BQ9BQE9 202 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 SFXN1Q9H9B4 322 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 ANKMY1Q9P2S6 941 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 KLK4Q9Y5K2 254 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 PROM1O43490 865 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 RORCP51449 518 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 SMSP52788 366 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 SF3B4Q15427 424 aaKnown RBP eCLIP15.56■□□□□ 0.086e-10■■■■■ 33.6
VPS54-201ENST00000272322 MAPK14Q16539 360 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 DUSP5Q16690 384 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 PLBD1Q6P4A8 553 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 PARGQ86W56 976 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 CPOQ8IVL8 374 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 NANOGP1Q8N7R0 232 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 MORN4Q8NDC4 146 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 C9orf43Q8TAL5 461 aaPredicted RBP15.56■□□□□ 0.08
VPS54-201ENST00000272322 PPP1R14BQ96C90 147 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 SECISBP2Q96T21 854 aaKnown RBP15.56■□□□□ 0.08
VPS54-201ENST00000272322 A0A1W2PQ09 198 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 A0A1W2PRQ8 180 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 E9PQ18 207 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 K7EQS6 105 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 HCRTR1O43613 425 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 ALOX5P09917 674 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 DRD2P14416 443 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 KLBQ86Z14 1044 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 KIAA1958Q8N8K9 716 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 OR2L8Q8NGY9 312 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 POLMQ9NP87 494 aaPredicted RBP15.56■□□□□ 0.08
VPS54-201ENST00000272322 CNOT2Q9NZN8 540 aaKnown RBP15.56■□□□□ 0.08
VPS54-201ENST00000272322 DSPPQ9NZW4 1301 aa15.56■□□□□ 0.08
VPS54-201ENST00000272322 EMC8O43402 210 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 EGFP01133 1207 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 CELA2BP08218 269 aaPredicted RBP15.55■□□□□ 0.08
VPS54-201ENST00000272322 ERGP11308 486 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 SLC9A3P48764 834 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 IL20RBQ6UXL0 311 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 PFN4Q8NHR9 129 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 PRRC1Q96M27 445 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 H2AFY2Q9P0M6 372 aaPredicted RBP15.55■□□□□ 0.08
VPS54-201ENST00000272322 FABP12A6NFH5 140 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 ACADMP11310 421 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 HSD17B2P37059 387 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 SMIM11AP58511 58 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 DEFA1P59665 94 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 DEFA3P59666 94 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 RUNX2Q13950 521 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 NCF4Q15080 339 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 FAM27D1Q5T7N8 215 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 C12orf73Q69YU5 71 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 OR4Q3Q8NH05 313 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 HMGB4Q8WW32 186 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 RASSF5Q8WWW0 418 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 NKX2-4Q9H2Z4 354 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 KLHL28Q9NXS3 571 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 WSB2Q9NYS7 404 aaPredicted RBP15.55■□□□□ 0.08
VPS54-201ENST00000272322 A8MVJ9 347 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 H3BSH0 61 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 RAB36O95755 333 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 CLUP10909 449 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 OR2B6P58173 313 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 SHC2P98077 582 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 GXYLT1Q4G148 440 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 SDE2Q6IQ49 451 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 FBXO42Q6P3S6 717 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 NUDT18Q6ZVK8 323 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 ASB15Q8WXK1 588 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 HERVK_113Q902F9 699 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 OR2M4Q96R27 311 aa15.55■□□□□ 0.08
VPS54-201ENST00000272322 FBXL4Q9UKA2 621 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms