RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ATG4BQ9Y4P1 393 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 A0A0C4DFX4 3053 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 RFXAPO00287 272 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 HTR1AP08908 422 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 ARL4DP49703 201 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 ADPRHP54922 357 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 KIR2DS3Q14952 304 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 ADPRMQ3LIE5 342 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 LEXMQ3ZCV2 418 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 FIGLAQ6QHK4 219 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 SLC37A3Q8NCC5 494 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 OR52P1PQ8NH57 321 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 GPR151Q8TDV0 419 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 MS4A6EQ96DS6 147 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 FRMD6Q96NE9 622 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 TRPM6Q9BX84 2022 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 METTL21EPA6NDL7 271 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 NARSO43776 548 aaKnown RBP15.32■□□□□ 0.04
CTCF-201ENST00000264010 PROS1P07225 676 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 PPP5CP53041 499 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 TEKQ02763 1124 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 CLEC12AQ5QGZ9 265 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 SLC27A4Q6P1M0 643 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 NLGN4XQ8N0W4 816 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 CACTIN-AS1Q8N1I8 211 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 PBX4Q9BYU1 374 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 PLA2G2FQ9BZM2 168 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 FANCFQ9NPI8 374 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 PLSCR3Q9NRY6 295 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 ENTPD6O75354 484 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 PRKRAO75569 313 aaKnown RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 ZNF888P0CJ79 500 aaPredicted RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 CKMT1AP12532 417 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 MYL9P24844 172 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ZNF155Q12901 538 aaPredicted RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 PODNL1Q6PEZ8 512 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 TMEM64Q6YI46 380 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 IZUMO1Q8IYV9 350 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ADGRF3Q8IZF5 1079 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 TP53I13Q8NBR0 393 aaPredicted RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 MRPL38Q96DV4 380 aaKnown RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 PRRC1Q96M27 445 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 MBD2Q9UBB5 411 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 C2orf74A8MZ97 194 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 HMGN1P05114 100 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 DRD1P21728 446 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 NOS3P29474 1203 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 MASP1P48740 699 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 STARP49675 285 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ILKQ13418 452 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 MPEG1Q2M385 716 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 CFAP77Q6ZQR2 320 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 LINC01555Q8NAE3 123 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 RHNO1Q9BSD3 238 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 CHST8Q9H2A9 424 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 TMEM27Q9HBJ8 222 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 RANGRFQ9HD47 186 aaPredicted RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 SLC17A4Q9Y2C5 497 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ZNF860A6NHJ4 632 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ELAVL4P26378 380 aaKnown RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 OR3A3P47888 321 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 SIM1P81133 766 aaPredicted RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 AQP6Q13520 282 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 SPHARQ15513 63 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 OR8K3Q8NH51 312 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 KIR3DX1Q9H7L2 352 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 HRASLS2Q9NWW9 162 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 SEC14L4Q9UDX3 406 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ZFR2Q9UPR6 939 aaKnown RBP15.31■□□□□ 0.04
CTCF-201ENST00000264010 SNX11Q9Y5W9 270 aa15.31■□□□□ 0.04
CTCF-201ENST00000264010 ANTXRLA6NF34 631 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 FAM227AF5H4B4 570 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SLC30A4O14863 429 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 PGRMC2O15173 223 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 DHFRP00374 187 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SEMG1P04279 462 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 PCMT1P22061 227 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 TSFMP43897 325 aaKnown RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 PCBP3P57721 371 aaKnown RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 ID2Q02363 134 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 C18orf63Q68DL7 685 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 OR6Q1Q8NGQ2 317 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 OR7D2Q96RA2 312 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 TAS2R7Q9NYW3 318 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 NDRG2Q9UN36 371 aaKnown RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 TCRBV21S2A2A0A5A6 115 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 PLRG1O43660 514 aaKnown RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 APBB3O95704 486 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 CBLP22681 906 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 PBX2P40425 430 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 GPR19Q15760 415 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 INAVAQ3KP66 663 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 CDC73Q6P1J9 531 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SLC36A4Q6YBV0 504 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 IQCF1Q8N6M8 205 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 FGF14Q92915 247 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 VOPP1Q96AW1 172 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 YIPF6Q96EC8 236 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SERINC2Q96SA4 455 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 NRTNQ99748 197 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms