RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 GSTM3P21266 225 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 S100A12P80511 92 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 CLEC12AQ5QGZ9 265 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 WASH2PQ6VEQ5 465 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF600Q6ZNG1 722 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 COMTD1Q86VU5 262 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 KLBQ86Z14 1044 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 KLHDC8AQ8IYD2 350 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 LINC00471Q8N535 108 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 FANK1Q8TC84 345 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 C12orf66Q96MD2 445 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF436Q9C0F3 470 aaPredicted RBP14.07□□□□□ -0.16
XRCC1-201ENST00000262887 SPRTNQ9H040 489 aaPredicted RBP14.07□□□□□ -0.16
XRCC1-201ENST00000262887 BTBD1Q9H0C5 482 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 SLC35C2Q9NQQ7 365 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 MAN2C1Q9NTJ4 1040 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 B4GALT6Q9UBX8 382 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 SH2B3Q9UQQ2 575 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 TMEM5Q9Y2B1 443 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 FAM170BA6NMN3 283 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 H7C4K7 107 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 HMGN4O00479 90 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 ADAM12O43184 909 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 MMP20O60882 483 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 UBXN7O94888 489 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 GALP22466 123 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 CCR6P51684 374 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 HSPB3Q12988 150 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 NHLRC3Q5JS37 347 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 HIST2H2AA3Q6FI13 130 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 KIAA1161Q6NSJ0 714 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 C6orf120Q7Z4R8 191 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 SIAH3Q8IW03 269 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF687Q8N1G0 1237 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 MORN4Q8NDC4 146 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 PTP4A1Q93096 173 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 KCTD12Q96CX2 325 aaKnown RBP14.07□□□□□ -0.16
XRCC1-201ENST00000262887 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 TREX2Q9BQ50 279 aaPredicted RBP14.07□□□□□ -0.16
XRCC1-201ENST00000262887 EFCAB11Q9BUY7 163 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 TMEM168Q9H0V1 697 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 SUV39H2Q9H5I1 410 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 SLAMF7Q9NQ25 335 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 MARCH5Q9NX47 278 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 GLS2Q9UI32 602 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 DYRK1BQ9Y463 629 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 HRH3Q9Y5N1 445 aa14.07□□□□□ -0.16
XRCC1-201ENST00000262887 KLF2Q9Y5W3 355 aaPredicted RBP14.07□□□□□ -0.16
XRCC1-201ENST00000262887 TSPAN6O43657 245 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 HMGA1P17096 107 aaKnown RBP14.06□□□□□ -0.16
XRCC1-201ENST00000262887 F8A1P23610 371 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 ATP6V1E1P36543 226 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 HAAOP46952 286 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 RAG2P55895 527 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 ZP1P60852 638 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 PLD1Q13393 1074 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 OPCMLQ14982 345 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 TFAP2EQ6VUC0 442 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 NLRC3Q7RTR2 1065 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 UXS1Q8NBZ7 420 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 RFKQ969G6 155 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 ECHDC3Q96DC8 303 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 METTL17Q9H7H0 456 aaPredicted RBP14.06□□□□□ -0.16
XRCC1-201ENST00000262887 POMT2Q9UKY4 750 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 RASD1Q9Y272 281 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 NPTNQ9Y639 398 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 GSAPA4D1B5 854 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 G3V3Q6 166 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 RFXAPO00287 272 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 NPC1O15118 1278 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 NFATC1O95644 943 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 CH25HO95992 272 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 UGT2B7P16662 529 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 C4BPBP20851 252 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 ERVK-21P61565 698 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 TSPAN5P62079 268 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 SNRPD1P62314 119 aaKnown RBP14.06□□□□□ -0.16
XRCC1-201ENST00000262887 MAP4K2Q12851 820 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 SYPL1Q16563 259 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 LRRC56Q8IYG6 542 aaPredicted RBP14.06□□□□□ -0.16
XRCC1-201ENST00000262887 LMNTD1Q8N9Z9 388 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 OR52N1Q8NH53 320 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF480Q8WV37 535 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 FOPNLQ96NB1 174 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 SMG9Q9H0W8 520 aaKnown RBP14.06□□□□□ -0.16
XRCC1-201ENST00000262887 ZDHHC6Q9H6R6 413 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 HCSTQ9UBK5 93 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 SLC9A8Q9Y2E8 581 aa14.06□□□□□ -0.16
XRCC1-201ENST00000262887 MRPS7Q9Y2R9 242 aaKnown RBP14.06□□□□□ -0.16
XRCC1-201ENST00000262887 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 RNF13O43567 381 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 CD3GP09693 182 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 C1GALT1C1LP0DN25 315 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 THBS2P35442 1172 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SELENOPP49908 381 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 ZSWIM7Q19AV6 140 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 RNASE12Q5GAN4 147 aaKnown RBP14.05□□□□□ -0.16
XRCC1-201ENST00000262887 BTN2A1Q7KYR7 527 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 TAS1R1Q7RTX1 841 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms