RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 DUSP18Q8NEJ0 188 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 OR8K5Q8NH50 307 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 MS4A6EQ96DS6 147 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 TMEM80Q96HE8 168 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 PLEKHB1Q9UF11 243 aaPredicted RBP21.2■□□□□ 0.98
MCF2L-201ENST00000261963 RABL2BQ9UNT1 228 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 CLCA3PQ9Y6N3 262 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 CKAP5Q14008 2032 aa21.2■□□□□ 0.98
MCF2L-201ENST00000261963 WWP2O00308 870 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 HCN1O60741 890 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 XKP51811 444 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 HMGN2P46Q86SG4 172 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 SUN3Q8TAQ9 357 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 FAIM2Q9BWQ8 316 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 C1QTNF2Q9BXJ5 285 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 POLR2J3Q9H1A7 115 aaKnown RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 MRPS30Q9NP92 439 aaKnown RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 PRDM7Q9NQW5 492 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ZSCAN32Q9NX65 697 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 DNAJC27Q9NZQ0 273 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 CLEC2DQ9UHP7 191 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 SLC17A4Q9Y2C5 497 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ATG4BQ9Y4P1 393 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 A0A1W2PR48 441 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ERI3O43414 337 aaKnown RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 SLC22A5O76082 557 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 CHRM4P08173 479 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 PRKAR1AP10644 381 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ALPPL2P10696 532 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 HIST1H1TP22492 207 aaPredicted RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 PEBP1P30086 187 aaKnown RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 MADCAM1Q13477 382 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ANGPT1Q15389 498 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 MRM1Q6IN84 353 aaKnown RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ABHD17CQ6PCB6 329 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 ZNF782Q6ZMW2 699 aaPredicted RBP21.19■□□□□ 0.98
MCF2L-201ENST00000261963 C9orf62Q8N4C0 152 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 MAN2C1Q9NTJ4 1040 aa21.19■□□□□ 0.98
MCF2L-201ENST00000261963 FAM240BA0A1B0GVZ2 78 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 A0A1W2PS29 197 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 H3BN98 237 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 SLC2A2P11168 524 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-201ENST00000261963 MAN2A2P49641 1150 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 SLC9A5Q14940 896 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 PODNL1Q6PEZ8 512 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 UBE2Q1Q7Z7E8 422 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 ATP6V1C2Q8NEY4 427 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 CNRIP1Q96F85 164 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-201ENST00000261963 SLC6A18Q96N87 628 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 BBS4Q96RK4 519 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 YIPF4Q9BSR8 244 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 MND1Q9BWT6 205 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 POLR2J2Q9GZM3 115 aaKnown RBP21.18■□□□□ 0.98
MCF2L-201ENST00000261963 NLKQ9UBE8 527 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 A0A1W2PRQ8 180 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 SCAMP1O15126 338 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 ERAL1O75616 437 aaKnown RBP21.18■□□□□ 0.98
MCF2L-201ENST00000261963 TPPPO94811 219 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 APODP05090 189 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 CLEC2LP0C7M8 214 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 NTSP30990 170 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 PRKAG1P54619 331 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 CLDN20P56880 219 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 LSM11P83369 360 aaKnown RBP eCLIP21.18■□□□□ 0.981e-7■■□□□ 13.5
MCF2L-201ENST00000261963 ACOT4Q8N9L9 421 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 SPHK1Q9NYA1 384 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 AUP1Q9Y679 476 aa21.18■□□□□ 0.98
MCF2L-201ENST00000261963 ATG2AQ2TAZ0 1938 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 BTN3A3O00478 584 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 ORC5O43913 435 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 TPST2O60704 377 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 HLA-DQB1P01920 261 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 TNNI3P19429 210 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 PPP2R1BP30154 601 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 IGFALSP35858 605 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 KHKP50053 298 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 SMIM11AP58511 58 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 KRT33BQ14525 404 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 TMEM64Q6YI46 380 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 BCDIN3DQ7Z5W3 292 aaKnown RBP21.17■□□□□ 0.98
MCF2L-201ENST00000261963 KCTD20Q7Z5Y7 419 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 OR2L3Q8NG85 312 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 KLHL6Q8WZ60 621 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 KXD1Q9BQD3 176 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 RAB11FIP5Q9BXF6 653 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 ANKRA2Q9H9E1 313 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 BCL2L10Q9HD36 194 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 TXNL4BQ9NX01 149 aaKnown RBP21.17■□□□□ 0.98
MCF2L-201ENST00000261963 I3L521 148 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 SNRNP200O75643 2136 aaKnown RBP21.17■□□□□ 0.98
MCF2L-201ENST00000261963 RFPL3O75679 317 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 ARSBP15848 533 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 ATP5A1P25705 553 aaKnown RBP21.17■□□□□ 0.98
MCF2L-201ENST00000261963 SOX9P48436 509 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 LASP1Q14847 261 aaKnown RBP21.17■□□□□ 0.98
MCF2L-201ENST00000261963 C7orf61Q8IZ16 206 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 OR6T1Q8NGN1 323 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 BBS10Q8TAM1 723 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 UPRTQ96BW1 309 aa21.17■□□□□ 0.98
MCF2L-201ENST00000261963 DOCK8Q8NF50 2099 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms