RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TTTY10Q9BZA0 68 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 MED20Q9H944 212 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 MCUBQ9NWR8 336 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 PRKAR1AP10644 381 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 PRKCAP17252 672 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 PCBP4P57723 403 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 CCDC58Q4VC31 144 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 C16orf62Q7Z3J2 963 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 TMEM163Q8TC26 289 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 OR8D1Q8WZ84 308 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 GALNT9Q9HCQ5 603 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 TESQ9UGI8 421 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 ZFR2Q9UPR6 939 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 ATG4BQ9Y4P1 393 aa13.58□□□□□ -0.24
SFSWAP-201ENST00000261674 RGS8P57771 180 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 TGM3Q08188 693 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 E2F2Q14209 437 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 MZT2BQ6NZ67 158 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF793Q6ZN11 406 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 NRMQ8IXM6 262 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 NRSN1Q8IZ57 195 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SPRYD4Q8WW59 207 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 WDFY2Q96P53 400 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 DDX31Q9H8H2 851 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 ZSCAN32Q9NX65 697 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 MAU2Q9Y6X3 613 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 TCF20Q9UGU0 1960 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SHISA3A0PJX4 238 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 IGLON5A6NGN9 336 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 OR52A4PA6NMU1 304 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SOCS6O14544 535 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SPINT1O43278 529 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 LYRM1O43325 122 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 HYAL3O43820 417 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 FCMRO60667 390 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 EPPINO95925 133 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 ACADMP11310 421 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 AHRP35869 848 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 TRIM23P36406 574 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SLC1A3P43003 542 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 STXBP1P61764 594 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 DUSP2Q05923 314 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 MRPL28Q13084 256 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SLC9A5Q14940 896 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 BTBD16Q32M84 506 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 PLEKHM3Q6ZWE6 761 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 UBE3DQ7Z6J8 389 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 TIGD4Q8IY51 512 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 TMEM145Q8NBT3 493 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SMAP2Q8WU79 429 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SNAPC3Q92966 411 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF514Q96K75 400 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 DPEP2Q9H4A9 486 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 SEMA4GQ9NTN9 838 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 CACNA1IQ9P0X4 2223 aa13.57□□□□□ -0.24
SFSWAP-201ENST00000261674 A0A1W2PPK0 400 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 NARSO43776 548 aaKnown RBP13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 FUT1P19526 365 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 ENDOUP21128 410 aaKnown RBP13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 IFNA8P32881 189 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 MC3RP41968 323 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 RPS5P46782 204 aaKnown RBP13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 TAS2R38P59533 333 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 FBXO15Q8NCQ5 510 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 MSLNLQ96KJ4 702 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 SPATA5L1Q9BVQ7 753 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 B3GAT2Q9NPZ5 323 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 DKK3Q9UBP4 350 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 MAFFQ9ULX9 164 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 TTC28Q96AY4 2481 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 TRBV23OR9-2A0A075B6M9 112 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 GABRPO00591 440 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 PAPLNO95428 1278 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 CDK5Q00535 292 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 LTB4RQ15722 352 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 FAM27D1Q5T7N8 215 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 CPOQ8IVL8 374 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 KLHDC8AQ8IYD2 350 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 MORN4Q8NDC4 146 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 PRRC1Q96M27 445 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 PIP5K1CO60331 668 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 REM1O75628 298 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 UBXN7O94888 489 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 LGI1O95970 557 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 PAK4O96013 591 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 FCARP24071 287 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 GJA4P35212 333 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 KHKP50053 298 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 GPLD1P80108 840 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 GALK2Q01415 458 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 RAB40BQ12829 278 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 EFR3AQ14156 821 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 C3orf38Q5JPI3 329 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 C1orf94Q6P1W5 598 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms