RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LMF2Q9BU23 707 aaKnown RBP20.78■□□□□ 0.92
SIX3-201ENST00000260653 PAPOLBQ9NRJ5 636 aaKnown RBP20.78■□□□□ 0.92
SIX3-201ENST00000260653 MMACHCQ9Y4U1 282 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 AGAP5A6NIR3 686 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 TPST2O60704 377 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 UGT2B11O75310 529 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 IL7RP16871 459 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 ACY1Q03154 408 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 CTU2Q2VPK5 515 aaKnown RBP20.77■□□□□ 0.92
SIX3-201ENST00000260653 KCTD21Q4G0X4 260 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 RNF220Q5VTB9 566 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 YOD1Q5VVQ6 348 aaPredicted RBP20.77■□□□□ 0.92
SIX3-201ENST00000260653 ZNF836Q6ZNA1 936 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 PRSS58Q8IYP2 241 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 AQP11Q8NBQ7 271 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 KCNE5Q9UJ90 142 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 PEX12O00623 359 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 KIAA0513O60268 411 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 PRAMEF2O60811 474 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 TIAF1O95411 115 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 TFAP2AP05549 437 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 TNNI3P19429 210 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 RFX3P48380 749 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 CD47Q08722 323 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 FUT7Q11130 342 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 ZNF770Q6IQ21 691 aaPredicted RBP20.77■□□□□ 0.92
SIX3-201ENST00000260653 MED25Q71SY5 747 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 ZAR1Q86SH2 424 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 OR4N2Q8NGD1 307 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 C16orf52Q8NHV5 167 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 GTPBP3Q969Y2 492 aaKnown RBP20.77■□□□□ 0.92
SIX3-201ENST00000260653 PSD2Q9BQI7 771 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 GABARAPL3Q9BY60 117 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 SAP130Q9H0E3 1048 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 TRIM45Q9H8W5 580 aaPredicted RBP20.77■□□□□ 0.92
SIX3-201ENST00000260653 PNO1Q9NRX1 252 aaKnown RBP20.77■□□□□ 0.92
SIX3-201ENST00000260653 BLOC1S6Q9UL45 172 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 IFT52Q9Y366 437 aa20.77■□□□□ 0.92
SIX3-201ENST00000260653 NUP210LQ5VU65 1888 aa20.77■□□□□ 0.91
SIX3-201ENST00000260653 IGKV3D-11A0A0A0MRZ8 115 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 C17orf105B2RV13 164 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 KCNK2O95069 426 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 CBLP22681 906 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 RNF144AP50876 292 aaPredicted RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 ISL1P61371 349 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 HOXC5Q00444 222 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 ZNHIT3Q15649 155 aaPredicted RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 MEP1AQ16819 746 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 SLC7A13Q8TCU3 470 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 PRRC1Q96M27 445 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 SLX1AQ9BQ83 275 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 OR10A5Q9H207 317 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 MAN2C1Q9NTJ4 1040 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 TMCC3Q9ULS5 477 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 BRINP1O60477 761 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 AK1P00568 194 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 LARS2Q15031 903 aaKnown RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 NNATQ16517 81 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 DCST1Q5T197 706 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 NPSR1Q6W5P4 371 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 QSOX2Q6ZRP7 698 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 SLC38A9Q8NBW4 561 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 PTPMT1Q8WUK0 201 aaPredicted RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 PELOQ9BRX2 385 aaKnown RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 FNDC11Q9BVV2 318 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 SLC7A5P2Q9GIP4 190 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 CACYBPQ9HB71 228 aaKnown RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 CTSFQ9UBX1 484 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 NDRG4Q9ULP0 352 aaKnown RBP20.76■□□□□ 0.91
SIX3-201ENST00000260653 SRPK3Q9UPE1 567 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 POFUT2Q9Y2G5 429 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 GMPPBQ9Y5P6 360 aa20.76■□□□□ 0.91
SIX3-201ENST00000260653 A8MUA0 341 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 GASTP01350 101 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 RPS4Y1P22090 263 aaKnown RBP20.75■□□□□ 0.91
SIX3-201ENST00000260653 IL18R1Q13478 541 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 KEAP1Q14145 624 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 PHF19Q5T6S3 580 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 RHBDD2Q6NTF9 364 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 Q6ZPB1 254 aaPredicted RBP20.75■□□□□ 0.91
SIX3-201ENST00000260653 DRAXINQ8NBI3 349 aaPredicted RBP20.75■□□□□ 0.91
SIX3-201ENST00000260653 GFM1Q96RP9 751 aaKnown RBP20.75■□□□□ 0.91
SIX3-201ENST00000260653 KLHL28Q9NXS3 571 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 ARRDC5A6NEK1 342 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 CLPSP04118 112 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 EEF1A1P68104 462 aaKnown RBP20.75■□□□□ 0.91
SIX3-201ENST00000260653 RHAGQ02094 409 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 ZNF615Q8N8J6 731 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 ZNF578Q96N58 590 aaPredicted RBP20.75■□□□□ 0.91
SIX3-201ENST00000260653 FUZQ9BT04 418 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 ZNF556Q9HAH1 456 aa20.75■□□□□ 0.91
SIX3-201ENST00000260653 A0A1W2PRQ8 180 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 TRIM64A6NGJ6 449 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 LINGO3P0C6S8 592 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 GALNSP34059 522 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 RGS8P57771 180 aaPredicted RBP20.74■□□□□ 0.91
SIX3-201ENST00000260653 RPP38P78345 283 aaKnown RBP20.74■□□□□ 0.91
SIX3-201ENST00000260653 IL5RAQ01344 420 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 DGCR6Q14129 220 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 FOXB2Q5VYV0 432 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms