RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZNF726A6NNF4 738 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 FAM171A2A8MVW0 826 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 GJB3O75712 270 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 RRAS2P62070 204 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 GRHL2Q6ISB3 625 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRFN4Q6PJG9 635 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SSX9Q7RTT3 188 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PDZD3Q86UT5 571 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CELF5Q8N6W0 485 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF709Q8N972 641 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR5M3Q8NGP4 307 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR5P2Q8WZ92 322 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CNN2Q99439 309 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 WNT6Q9Y6F9 365 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ENPP4Q9Y6X5 453 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 GPR39O43194 453 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 KNG1P01042 644 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 HLA-EP13747 358 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ARSBP15848 533 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PKLRP30613 574 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ARL3P36405 182 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF33BQ06732 778 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAB11BQ15907 218 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 KIAA1211LQ6NV74 962 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 NRMQ8IXM6 262 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 LSMEM2Q8N112 164 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR13C3Q8NGS6 347 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 COPS7AQ9UBW8 275 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PTGESO14684 152 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ADRB3P13945 408 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 TYRP14679 529 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF30P17039 623 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CFL1P23528 166 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 APEX1P27695 318 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTR1BP42025 376 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 NR0B1P51843 470 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTR1AP61163 376 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 POU6F2P78424 691 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 DPY19L2P1Q6NXN4 242 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF585AQ6P3V2 769 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PAPD4Q6PIY7 484 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 VASH1Q7L8A9 365 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PXKQ7Z7A4 578 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 RETREG3Q86VR2 466 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CYB561A3Q8NBI2 242 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CD200R1Q8TD46 325 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ARL5BQ96KC2 179 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SAMD8Q96LT4 415 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 EPYCQ99645 322 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 TXNL4BQ9NX01 149 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ATXN7L1Q9ULK2 861 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 FEZF1A0PJY2 475 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SCDO00767 359 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 KCNJ13O60928 360 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ADORA3P0DMS8 318 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 HSD17B2P37059 387 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 TBCEQ15813 527 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR2G6Q5TZ20 316 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 TPGS2Q68CL5 300 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CPOQ8IVL8 374 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR10K1Q8NGX5 313 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SYNPRQ8TBG9 265 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PROKR1Q8TCW9 393 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SMIM14Q96QK8 99 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 RCE1Q9Y256 329 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 B3GALT1Q9Y5Z6 326 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 KRBOX1C9JBD0 128 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 RFXAPO00287 272 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PRAF2O60831 178 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SEC14L2O76054 403 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 PTHP01270 115 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 C1GALT1C1LP0DN25 315 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 CD79BP40259 229 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 KIAA1024LP59773 190 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 TBPL1P62380 186 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SELENOWP63302 87 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRRC26Q2I0M4 334 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ITPRIPL2Q3MIP1 535 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ENPP7Q6UWV6 458 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SPRED1Q7Z699 444 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF546Q86UE3 836 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 REM2Q8IYK8 340 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF527Q8NB42 609 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR4Q3Q8NH05 313 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLAMF9Q96A28 289 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 F2RL3Q96RI0 385 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 RXFP3Q9NSD7 469 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 C5AR2Q9P296 337 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 OSGIN1Q9UJX0 560 aa9.24□□□□□ -0.93
CTDSPL2-201ENST00000260327 SOX1O00570 391 aaPredicted RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTA2P62736 377 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTG2P63267 376 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TAP2Q03519 686 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms