RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 OVCH1Q7RTY7 1134 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 C16orf52Q8NHV5 167 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 STT3BQ8TCJ2 826 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 PIK3R3Q92569 461 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 SLC35B4Q969S0 331 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 SENP5Q96HI0 755 aaPredicted RBP13.18□□□□□ -0.3
SDF2-201ENST00000247020 PRRX2Q99811 253 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 TMEM9BQ9NQ34 198 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 PNO1Q9NRX1 252 aaKnown RBP13.18□□□□□ -0.3
SDF2-201ENST00000247020 SLC22A11Q9NSA0 550 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 RXFP3Q9NSD7 469 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 OCIAD1Q9NX40 245 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 SCOCQ9UIL1 159 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 MKL2Q9ULH7 1088 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
SDF2-201ENST00000247020 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 FAM86C2PA6NEL3 165 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 VSTM2BA6NLU5 285 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 OR6C76A6NM76 312 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 J3KTA2 159 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 UGT2B11O75310 529 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 NME6O75414 186 aaPredicted RBP13.17□□□□□ -0.3
SDF2-201ENST00000247020 TIAF1O95411 115 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 H1F0P07305 194 aaKnown RBP13.17□□□□□ -0.3
SDF2-201ENST00000247020 ZGLP1P0C6A0 271 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 PRKACGP22612 351 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 PIGAP37287 484 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 PGDP52209 483 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 SLC37A1P57057 533 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 EEF1A1P68104 462 aaKnown RBP13.17□□□□□ -0.3
SDF2-201ENST00000247020 DGCR6Q14129 220 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 NSDHLQ15738 373 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.17□□□□□ -0.3
SDF2-201ENST00000247020 EXOC3L2Q2M3D2 409 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 DEF8Q6ZN54 512 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 OLIG3Q7RTU3 272 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 VRK2Q86Y07 508 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 TAGAPQ8N103 731 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 OR4D11Q8NGI4 311 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 TSLPQ969D9 159 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 CDC6Q99741 560 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 ZNF696Q9H7X3 374 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 NMNAT1Q9HAN9 279 aaPredicted RBP13.17□□□□□ -0.3
SDF2-201ENST00000247020 KRT84Q9NSB2 600 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 FAM118AQ9NWS6 357 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 NXT1Q9UKK6 140 aaKnown RBP13.17□□□□□ -0.3
SDF2-201ENST00000247020 TMCC3Q9ULS5 477 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 A4GNTQ9UNA3 340 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 POFUT2Q9Y2G5 429 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 SEC16AO15027 2179 aa13.17□□□□□ -0.3
SDF2-201ENST00000247020 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 OR2W5A6NFC9 320 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 M0R3H8 397 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 HRKO00198 91 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 FAAHO00519 579 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 FFAR1O14842 300 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 UGT2B17O75795 530 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 CCNB2O95067 398 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 DDAH2O95865 285 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 UBTFL6P0CB48 400 aaPredicted RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 CT45A8P0DMV1 189 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 CT45A9P0DMV2 189 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 AGXTP21549 392 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 LCN1P31025 176 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 PPICP45877 212 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 YAP1P46937 504 aaKnown RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 KEAP1Q14145 624 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 GANABQ14697 944 aaKnown RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 GPR68Q15743 365 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 CT45A2Q5DJT8 189 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 DCST1Q5T197 706 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 CCNJQ5T5M9 372 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 ZNF836Q6ZNA1 936 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 B3GNT8Q7Z7M8 397 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 LACC1Q8IV20 430 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 OFCC1Q8IZS5 231 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 SLC38A9Q8NBW4 561 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 TOR1AIP2Q8NFQ8 470 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 OR6T1Q8NGN1 323 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 SLC2A12Q8TD20 617 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 DOK4Q8TEW6 326 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 ZNF721Q8TF20 911 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 ZG16BQ96DA0 208 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 MBOAT4Q96T53 435 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms