RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 IGHV5-51A0A0C4DH38 117 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 CPSF4LA6NMK7 179 aaKnown RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 NUDT21O43809 227 aaKnown RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 KIAA0513O60268 411 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 OR5F1O95221 314 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 SOX14O95416 240 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 RPS4Y1P22090 263 aaKnown RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 ZNF155Q12901 538 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 COL9A2Q14055 689 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 TBCEQ15813 527 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 ENTPD8Q5MY95 495 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 C12orf73Q69YU5 71 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 RRM2BQ7LG56 351 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 SHISA5Q8N114 240 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 HOXB13Q92826 284 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 MCHR1Q99705 422 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 ARMC7Q9H6L4 198 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 PRTFDC1Q9NRG1 225 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 CNOT2Q9NZN8 540 aaKnown RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 RNF215Q9Y6U7 377 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 THADAQ6YHU6 1953 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 A0A1W2PPW3 197 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 FITM1A5D6W6 292 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 EFCAB10A6NFE3 127 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 H0YIG0 161 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 FRS3O43559 492 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 NKX2-2O95096 273 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 PSMB9P28065 219 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 EEF1A1P68104 462 aaKnown RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 IGLV3-21P80748 117 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 GRM7Q14831 915 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 ZNHIT3Q15649 155 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 CCNJQ5T5M9 372 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 UBE2UQ5VVX9 321 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 RANBP3LQ86VV4 465 aaPredicted RBP21.67■■□□□ 1.06
MSX2-201ENST00000239243 GNPDA2Q8TDQ7 276 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 EVA1AQ9H8M9 152 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 C11orf16Q9NQ32 467 aa21.67■■□□□ 1.06
MSX2-201ENST00000239243 TRIOO75962 3097 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 A0A087WUU8 490 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 MED26O95402 600 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 CBX7O95931 251 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 DCNP07585 359 aaKnown RBP21.66■■□□□ 1.06
MSX2-201ENST00000239243 FNTBP49356 437 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 NFATC3Q12968 1075 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 STX19Q8N4C7 294 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 OR52R1Q8NGF1 315 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 DOK4Q8TEW6 326 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 PIK3R3Q92569 461 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 RIT1Q92963 219 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 GUCD1Q96NT3 240 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 RBCK1Q9BYM8 510 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 SEMA4GQ9NTN9 838 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 ABCA7Q8IZY2 2146 aa21.66■■□□□ 1.06
MSX2-201ENST00000239243 NID1P14543 1247 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 GABRA3P34903 492 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 AP1ARQ63HQ0 302 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 ZNF730Q6ZMV8 503 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 OR8J1Q8NGP2 316 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 MMABQ96EY8 250 aaPredicted RBP21.65■■□□□ 1.06
MSX2-201ENST00000239243 ZNF578Q96N58 590 aaPredicted RBP21.65■■□□□ 1.06
MSX2-201ENST00000239243 HRO43593 1189 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 GUSBP08236 651 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 NUDT6P53370 316 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 DECR1Q16698 335 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 ACOT11Q8WXI4 607 aaPredicted RBP21.65■■□□□ 1.06
MSX2-201ENST00000239243 DGAT2Q96PD7 388 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 LMF2Q9BU23 707 aaKnown RBP21.65■■□□□ 1.06
MSX2-201ENST00000239243 AMBNQ9NP70 447 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 EML5Q05BV3 1969 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 TP53BP1Q12888 1972 aaPredicted RBP21.65■■□□□ 1.06
MSX2-201ENST00000239243 CACNA1IQ9P0X4 2223 aa21.65■■□□□ 1.06
MSX2-201ENST00000239243 ZNF749O43361 778 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 DUX1O43812 170 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 BRINP1O60477 761 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 TP53P04637 393 aaPredicted RBP21.64■■□□□ 1.06
MSX2-201ENST00000239243 TNNI3P19429 210 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 TRHRP34981 398 aaPredicted RBP21.64■■□□□ 1.06
MSX2-201ENST00000239243 HSD17B7P56937 341 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 BIKQ13323 160 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 TMEM201Q5SNT2 666 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 SLC16A12Q6ZSM3 486 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 PLXDC1Q8IUK5 500 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 C9orf43Q8TAL5 461 aaPredicted RBP21.64■■□□□ 1.06
MSX2-201ENST00000239243 PIGXQ8TBF5 258 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 PELOQ9BRX2 385 aaKnown RBP21.64■■□□□ 1.06
MSX2-201ENST00000239243 ALOXE3Q9BYJ1 711 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 GPR83Q9NYM4 423 aa21.64■■□□□ 1.06
MSX2-201ENST00000239243 GABARAPO95166 117 aa21.64■■□□□ 1.05
MSX2-201ENST00000239243 GPR3P46089 330 aa21.64■■□□□ 1.05
MSX2-201ENST00000239243 TSPAN31Q12999 210 aa21.64■■□□□ 1.05
MSX2-201ENST00000239243 NKAIN2Q5VXU1 208 aa21.64■■□□□ 1.05
MSX2-201ENST00000239243 YIPF6Q96EC8 236 aa21.64■■□□□ 1.05
MSX2-201ENST00000239243 SLC41A3Q96GZ6 507 aa21.64■■□□□ 1.05
MSX2-201ENST00000239243 KRCC1Q9NPI7 259 aaPredicted RBP21.64■■□□□ 1.05
MSX2-201ENST00000239243 IGHV1OR21-1A0A087WYE8 117 aa21.63■■□□□ 1.05
MSX2-201ENST00000239243 M0R129 80 aa21.63■■□□□ 1.05
MSX2-201ENST00000239243 BCL10O95999 233 aa21.63■■□□□ 1.05
MSX2-201ENST00000239243 PIPP12273 146 aaPredicted RBP21.63■■□□□ 1.05
MSX2-201ENST00000239243 GLB1P16278 677 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms