RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GIPC3Q8TF64 312 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 ARHGDIGQ99819 225 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 NMNAT1Q9HAN9 279 aaPredicted RBP14.13□□□□□ -0.15
HDHD3-201ENST00000238379 POLE3Q9NRF9 147 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 FAM118AQ9NWS6 357 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 KCNE5Q9UJ90 142 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 A4GNTQ9UNA3 340 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 ZNF443Q9Y2A4 671 aaPredicted RBP14.13□□□□□ -0.15
HDHD3-201ENST00000238379 GPR55Q9Y2T6 319 aaPredicted RBP14.13□□□□□ -0.15
HDHD3-201ENST00000238379 PCDHGA8Q9Y5G5 932 aa14.13□□□□□ -0.15
HDHD3-201ENST00000238379 RALGAPA1Q6GYQ0 2036 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 A8MUA0 341 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 THBS1P07996 1170 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 HBQ1P09105 142 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 CT45A8P0DMV1 189 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 CT45A9P0DMV2 189 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 DCDP81605 110 aaKnown RBP14.12□□□□□ -0.15
HDHD3-201ENST00000238379 KCNAB2Q13303 367 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 ELAVL1Q15717 326 aaKnown RBP14.12□□□□□ -0.15
HDHD3-201ENST00000238379 NPTX1Q15818 432 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 MAPK14Q16539 360 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 CT45A2Q5DJT8 189 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 COLEC12Q5KU26 742 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 TSPYL5Q86VY4 417 aaPredicted RBP14.12□□□□□ -0.15
HDHD3-201ENST00000238379 PLPP5Q8NEB5 264 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 OR4N2Q8NGD1 307 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 PHF10Q8WUB8 498 aaKnown RBP14.12□□□□□ -0.15
HDHD3-201ENST00000238379 PMM1Q92871 262 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 RMND5BQ96G75 393 aaPredicted RBP14.12□□□□□ -0.15
HDHD3-201ENST00000238379 CTRCQ99895 268 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 TRIM45Q9H8W5 580 aaPredicted RBP14.12□□□□□ -0.15
HDHD3-201ENST00000238379 RLIMQ9NVW2 624 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 ZNF232Q9UNY5 417 aa14.12□□□□□ -0.15
HDHD3-201ENST00000238379 CLDN24A6NM45 220 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PRR33A8MZF0 331 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PCDH17O14917 1159 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 DDAH2O95865 285 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 IGKV1D-16P01601 117 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 IGKV3-11P04433 115 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 GUSBP08236 651 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ZGLP1P0C6A0 271 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 CCL4P13236 92 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 IL7RP16871 459 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 TRHRP34981 398 aaPredicted RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 POLR2IP36954 125 aaKnown RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PIGAP37287 484 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 SLC37A1P57057 533 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 EEF1A1P68104 462 aaKnown RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ZNF836Q6ZNA1 936 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 GALNT5Q7Z7M9 940 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ZAR1Q86SH2 424 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 SLC5A8Q8N695 610 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ZNF321PQ8N8H1 164 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ATG16L2Q8NAA4 619 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PIK3C3Q8NEB9 887 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 OR10G2Q8NGC3 310 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 FEVQ99581 238 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ORC6Q9Y5N6 252 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 CLCA3PQ9Y6N3 262 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 TRBV4-1A0A0J9YWV2 114 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PEX12O00623 359 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 POLR1CO15160 346 aaPredicted RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 CBFA2T3O75081 653 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 UGT2B17O75795 530 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 DBIP07108 87 aaKnown RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 FOXL2P58012 376 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 MC2RQ01718 297 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 OCA2Q04671 838 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PIN1Q13526 163 aaPredicted RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 LARS2Q15031 903 aaKnown RBP14.11□□□□□ -0.15
HDHD3-201ENST00000238379 TTC23Q5W5X9 447 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 KRT80Q6KB66 452 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ISLR2Q6UXK2 745 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 SHISA6Q6ZSJ9 500 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 OVCH1Q7RTY7 1134 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 NAXDQ8IW45 347 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 OFCC1Q8IZS5 231 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ZSCAN1Q8NBB4 408 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 MUS81Q96NY9 551 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ALPK1Q96QP1 1244 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PSD2Q9BQI7 771 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 ITPAQ9BY32 194 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 Q9N2J8 555 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 KLHL28Q9NXS3 571 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 KIF17Q9P2E2 1029 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 PRODH2Q9UF12 536 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 SLC13A4Q9UKG4 626 aa14.11□□□□□ -0.15
HDHD3-201ENST00000238379 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 SLC16A6O15403 523 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 FRS3O43559 492 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 DYRK3O43781 588 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 TPST2O60704 377 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 H1F0P07305 194 aaKnown RBP14.1□□□□□ -0.15
HDHD3-201ENST00000238379 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 NID1P14543 1247 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 CCKBRP32239 447 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 TMEM154Q6P9G4 183 aa14.1□□□□□ -0.15
HDHD3-201ENST00000238379 SLC2A12Q8TD20 617 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms