RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RNF13O43567 381 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 RGS9O75916 674 aaPredicted RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 SLC2A10O95528 541 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 FGBP02675 491 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 TPOP07202 933 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 TALDO1P37837 337 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 NNMTP40261 264 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 RFX3P48380 749 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 IKZF1Q13422 519 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 SMARCD3Q6STE5 483 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 UBE3DQ7Z6J8 389 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 OAFQ86UD1 273 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 GPR135Q8IZ08 494 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 SUN3Q8TAQ9 357 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 RAD51AP1Q96B01 352 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 OMA1Q96E52 524 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 DTD2Q96FN9 168 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 ZNF764Q96H86 408 aaPredicted RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 CCDC120Q96HB5 630 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 MRGPRX3Q96LB0 322 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 PINK1Q9BXM7 581 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 SAGE1Q9NXZ1 904 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 GPR55Q9Y2T6 319 aaPredicted RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 CPSF4LA6NMK7 179 aaKnown RBP14.53□□□□□ -0.08
DDX55-201ENST00000238146 PPM1DO15297 605 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 CXCL3P19876 107 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 HTR1FP30939 366 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 THBS2P35442 1172 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 PITPNBP48739 271 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 SRP9P49458 86 aaKnown RBP14.53□□□□□ -0.08
DDX55-201ENST00000238146 KHKP50053 298 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 LASP1Q14847 261 aaKnown RBP14.53□□□□□ -0.08
DDX55-201ENST00000238146 TRAM2Q15035 370 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 PIP5KL1Q5T9C9 394 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 KRT74Q7RTS7 529 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 NRSN1Q8IZ57 195 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 SIRT6Q8N6T7 355 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 SAMD12Q8N8I0 201 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 LRRC20Q8TCA0 184 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 DIO2Q92813 273 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 ABHD1Q96SE0 405 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 AIF1LQ9BQI0 150 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 TNFRSF10DQ9UBN6 386 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 IL20RAQ9UHF4 553 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 NUP50Q9UKX7 468 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 KCNE3Q9Y6H6 103 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 CSNK1G3Q9Y6M4 447 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 SOCS6O14544 535 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 TEX28O15482 410 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 UBL4AP11441 157 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 SYN1P17600 705 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 RNF144AP50876 292 aaPredicted RBP14.53□□□□□ -0.08
DDX55-201ENST00000238146 TMEM44Q2T9K0 475 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 RRM2BQ7LG56 351 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 FAM20CQ8IXL6 584 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 FBXL6Q8N531 539 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 ZNF366Q8N895 744 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 OSTF1Q92882 214 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 ZG16BQ96DA0 208 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 ART5Q96L15 291 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 CAMK1GQ96NX5 476 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 KCNN2Q9H2S1 579 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 DPEP2Q9H4A9 486 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 IL20Q9NYY1 176 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 MARK1Q9P0L2 795 aa14.53□□□□□ -0.08
DDX55-201ENST00000238146 OR5K3A6NET4 321 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 H7BY64 318 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 ALPPL2P10696 532 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 ANXA3P12429 323 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 TYRP14679 529 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 SHC1P29353 583 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 RBMS1P29558 406 aaKnown RBP14.52□□□□□ -0.08
DDX55-201ENST00000238146 NCBP2P52298 156 aaKnown RBP eCLIP14.52□□□□□ -0.083e-7■□□□□ 10.4
DDX55-201ENST00000238146 PARS2Q7L3T8 475 aaKnown RBP14.52□□□□□ -0.08
DDX55-201ENST00000238146 PIGXQ8TBF5 258 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 RGMAQ96B86 450 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 COQ10AQ96MF6 247 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 PRAP1Q96NZ9 151 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 SORCS2Q96PQ0 1159 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 ZCCHC2Q9C0B9 1178 aaKnown RBP14.52□□□□□ -0.08
DDX55-201ENST00000238146 HINT3Q9NQE9 182 aaKnown RBP14.52□□□□□ -0.08
DDX55-201ENST00000238146 ZNF624Q9P2J8 865 aaPredicted RBP14.52□□□□□ -0.08
DDX55-201ENST00000238146 RASD1Q9Y272 281 aa14.52□□□□□ -0.08
DDX55-201ENST00000238146 COL4A3Q01955 1670 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 A0A0G2JPF8 293 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 HNRNPCL2B2RXH8 293 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 HNRNPCL3B7ZW38 293 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 J3QRE1 110 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 KIAA0355O15063 1070 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 NDUFS4O43181 175 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 PRKRAO75569 313 aaKnown RBP14.52□□□□□ -0.09
DDX55-201ENST00000238146 NFATC1O95644 943 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 HMGN2P05204 90 aaKnown RBP14.52□□□□□ -0.09
DDX55-201ENST00000238146 HNRNPCL4P0DMR1 293 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 ZNF250P15622 560 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 POLR2CP19387 275 aaPredicted RBP14.52□□□□□ -0.09
DDX55-201ENST00000238146 KELP23276 732 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 TRHRP34981 398 aaPredicted RBP14.52□□□□□ -0.09
DDX55-201ENST00000238146 PGGHGQ32M88 737 aa14.52□□□□□ -0.09
DDX55-201ENST00000238146 SLC36A2Q495M3 483 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms