RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CSNK1G1Q9HCP0 422 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 NKX1-2Q9UD57 310 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 KCNN3Q9UGI6 736 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 SLC35A3Q9Y2D2 325 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 ADAM12O43184 909 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 SYT7O43581 403 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 MAS1P04201 325 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 UCHL1P09936 223 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 ICAM2P13598 275 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 HLA-FP30511 346 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 PITPNBP48739 271 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 ATXN7L3Q14CW9 347 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 SFT2D3Q587I9 215 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 CNEP1R1Q8N9A8 125 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF285Q96NJ3 590 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 ULBP3Q9BZM4 244 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 FAM86C1Q9NVL1 165 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 UBE2J1Q9Y385 318 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 TRBV11-1A0A0K0K1C0 115 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 CSNK1EP49674 416 aaKnown RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 RUNDC3AQ59EK9 446 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 NADSYN1Q6IA69 706 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 TMEM173Q86WV6 379 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 UHRF1Q96T88 793 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 FEVQ99581 238 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 GPR160Q9UJ42 338 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 PCDHB10Q9UN67 800 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 MPPED1O15442 326 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 RGS9O75916 674 aaPredicted RBP17.9■□□□□ 0.46
SMPD3-201ENST00000219334 IFNA5P01569 189 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 ARL6IP1Q15041 203 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 MLF2Q15773 248 aaPredicted RBP17.9■□□□□ 0.46
SMPD3-201ENST00000219334 LANCL3Q6ZV70 420 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 CREB3L1Q96BA8 519 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 MSANTD3Q96H12 275 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 HDHD5Q9BXW7 423 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 ABRACLQ9P1F3 81 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 BOKQ9UMX3 212 aaPredicted RBP17.9■□□□□ 0.46
SMPD3-201ENST00000219334 FESP07332 822 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 PVRP15151 417 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 GGT1P19440 569 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 PSPHP78330 225 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 LETMD1Q6P1Q0 360 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 ELMOD2Q8IZ81 293 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 METTL25Q8N6Q8 603 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 SEC14L1Q92503 715 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 MGLLQ99685 303 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF160Q9HCG1 818 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 EMC3Q9P0I2 261 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 HCSTQ9UBK5 93 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 REV1Q9UBZ9 1251 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 PCDHA9Q9Y5H5 950 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 LDB3O75112 727 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 C7P10643 843 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 MTNR1AP48039 350 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 EEF1A1P68104 462 aaKnown RBP17.9■□□□□ 0.46
SMPD3-201ENST00000219334 EEF1A2Q05639 463 aaKnown RBP17.9■□□□□ 0.46
SMPD3-201ENST00000219334 RAB11BQ15907 218 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 MMP27Q9H306 513 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 PPP1R3DO95685 299 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 HTR3AP46098 478 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 PLGLAQ15195 96 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 UGT2A3Q6UWM9 527 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 NAGSQ8N159 534 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 KLHL42Q9P2K6 505 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 KAT6AQ92794 2004 aa17.9■□□□□ 0.46
SMPD3-201ENST00000219334 LRRTM2O43300 516 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 YES1P07947 543 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 UGT8Q16880 541 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 VTCN1Q7Z7D3 282 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 GOLM1Q8NBJ4 401 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 GPN2Q9H9Y4 310 aaPredicted RBP17.89■□□□□ 0.46
SMPD3-201ENST00000219334 DNAJB11Q9UBS4 358 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 BTNL2Q9UIR0 455 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 RIMS3Q9UJD0 308 aa17.89■□□□□ 0.46
SMPD3-201ENST00000219334 M0R036 132 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 C12orf43Q96C57 262 aaKnown RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 CUTCQ9NTM9 273 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 SLC7A7Q9UM01 511 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 TRAV6A0A075B6T7 132 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 PLSCR5A0PG75 271 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 ISPDA4D126 451 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 CD8B2A6NJW9 211 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 CNOT4O95628 575 aaKnown RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 CD8BP10966 210 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 CD97P48960 835 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 RRADP55042 308 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 DEFA5Q01523 94 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 SLC14A2Q15849 920 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 ANKRD54Q6NXT1 300 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 XKR5Q6UX68 686 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 PIANPQ8IYJ0 282 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 CHRDQ9H2X0 955 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 SRPX2O60687 465 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 PENKP01210 267 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 FUT1P19526 365 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 OR7A5Q15622 319 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF789Q5FWF6 425 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms