RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CD8B2A6NJW9 211 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 GABRPO00591 440 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 HLA-DQB1P01920 261 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 CCNYL3P0C7X3 344 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 CD8BP10966 210 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 BCL6P41182 706 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 EVX1P49640 407 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 PRDX1Q06830 199 aaKnown RBP16.18■□□□□ 0.18
USB1-201ENST00000219281 C18orf63Q68DL7 685 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 NKAIN4Q8IVV8 208 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 BBS1Q8NFJ9 593 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 NEIL3Q8TAT5 605 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 PIGXQ8TBF5 258 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 SFXN5Q8TD22 340 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 SPRYD4Q8WW59 207 aaPredicted RBP16.18■□□□□ 0.18
USB1-201ENST00000219281 DIO2Q92813 273 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 FGF13Q92913 245 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 RIPOR3Q96MK2 946 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 SLC38A1Q9H2H9 487 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 GIMAP4Q9NUV9 329 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 RBFOX1Q9NWB1 397 aaKnown RBP16.18■□□□□ 0.18
USB1-201ENST00000219281 NLKQ9UBE8 527 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 DPP7Q9UHL4 492 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 LIPT1Q9Y234 373 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.18■□□□□ 0.18
USB1-201ENST00000219281 ASB4Q9Y574 426 aa16.18■□□□□ 0.18
USB1-201ENST00000219281 C2orf92A0A1B0GVN3 265 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 IGLON5A6NGN9 336 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 SURF4O15260 269 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 PRKAR1AP10644 381 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 ALAS2P22557 587 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 GPR4P46093 362 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 ST3GAL3Q11203 375 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 DSG2Q14126 1118 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 ZNF234Q14588 700 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 AADACL4Q5VUY2 407 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 MZT2BQ6NZ67 158 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 TMEM145Q8NBT3 493 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 OR56A1Q8NGH5 318 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 RFKQ969G6 155 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 C12orf66Q96MD2 445 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 INSM2Q96T92 566 aaPredicted RBP16.17■□□□□ 0.18
USB1-201ENST00000219281 RPRD1BQ9NQG5 326 aaKnown RBP16.17■□□□□ 0.18
USB1-201ENST00000219281 PCDHGB7Q9Y5F8 929 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 DNMT3AQ9Y6K1 912 aaPredicted RBP16.17■□□□□ 0.18
USB1-201ENST00000219281 FAM25AB3EWG3 89 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 FAM25CB3EWG5 89 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 FAM25GB3EWG6 89 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 LYRM1O43325 122 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 LATO43561 262 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 SLC2A10O95528 541 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 AIFM1O95831 613 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 HLA-DPB1P04440 258 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 EFR3AQ14156 821 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 KLHL36Q8N4N3 616 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 ACOT4Q8N9L9 421 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 OR2A1Q8NGT9 310 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 OSGEPL1Q9H4B0 414 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 POLMQ9NP87 494 aaPredicted RBP16.17■□□□□ 0.18
USB1-201ENST00000219281 DEC1Q9P2X7 70 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 ENTPD4Q9Y227 616 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 CHST2Q9Y4C5 530 aa16.17■□□□□ 0.18
USB1-201ENST00000219281 FAM240BA0A1B0GVZ2 78 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 SYT5O00445 386 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 AKAP8O43823 692 aaKnown RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 PRKCAP17252 672 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 PTNP21246 168 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 HIST1H1TP22492 207 aaPredicted RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 ATP6V1E1P36543 226 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 MC3RP41968 323 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 GALK2Q01415 458 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 TGM3Q08188 693 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 MLF2Q15773 248 aaPredicted RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 TMEM35AQ53FP2 167 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 SYCE2Q6PIF2 218 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 METAP1DQ6UB28 335 aaPredicted RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 CACUL1Q86Y37 369 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 KLBQ86Z14 1044 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 TCTE3Q8IZS6 198 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 RAB42Q8N4Z0 105 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 NUP43Q8NFH3 380 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 OSTF1Q92882 214 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 SMARCD2Q92925 531 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 MS4A6EQ96DS6 147 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 ZC3HAV1LQ96H79 300 aaKnown RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 ZNF649Q9BS31 505 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 OR1A2Q9Y585 309 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 DVL2O14641 736 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 PROM1O43490 865 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 PIP5K1CO60331 668 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 CPNE3O75131 537 aaKnown RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 ALX3O95076 343 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 FAM157BP0CG42 384 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 STAT5AP42229 794 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 CTBP2P56545 445 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 ZIC1Q15915 447 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 WSCD2Q2TBF2 565 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 DUSP18Q8NEJ0 188 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 OR9A2Q8NGT5 310 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms