RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 DNM1P34Q6PK57 102 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 NPLOC4Q8TAT6 608 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 BRIX1Q8TDN6 353 aaKnown RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 NEURL2Q9BR09 285 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SAMD10Q9BYL1 202 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SLC6A16Q9GZN6 736 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 APMAPQ9HDC9 416 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 GKN1Q9NS71 199 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ZNF487B1APH4 448 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 NCR1O76036 304 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 C8orf89P0DMQ9 161 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 NDUFV2P19404 249 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 BDKRB1P46663 353 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SLC10A2Q12908 348 aaPredicted RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 PDZK1IP1Q13113 114 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 LRRC73Q5JTD7 316 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SLC29A4Q7RTT9 530 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 TRIM46Q7Z4K8 759 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 CMIPQ8IY22 773 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 OR52B6Q8NGF0 335 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 C20orf27Q9GZN8 174 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 EMCNQ9ULC0 261 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 CD53P19397 219 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 S1PR1P21453 382 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 MAOBP27338 520 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 APEX1P27695 318 aaKnown RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 INCA1Q0VD86 236 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 KCNC3Q14003 757 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 C2orf27AQ580R0 203 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 METAP1DQ6UB28 335 aaPredicted RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 APOOLQ6UXV4 268 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 GDPD3Q7L5L3 318 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 PDZD3Q86UT5 571 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 NAXEQ8NCW5 288 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 STEAP2Q8NFT2 490 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 OR5W2Q8NH69 310 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SCARB1Q8WTV0 552 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 TLR9Q9NR96 1032 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SAGE1Q9NXZ1 904 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 RCE1Q9Y256 329 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ANKRD66B4E2M5 251 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 MTX2O75431 263 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 F2P00734 622 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 MBP02144 154 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 RHOP08100 348 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 BMP1P13497 986 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ETFAP13804 333 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 CDK2P24941 298 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 RBMS1P29558 406 aaKnown RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 S100A11P31949 105 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 C1orf94Q6P1W5 598 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 IL20RBQ6UXL0 311 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ZNF550Q7Z398 422 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 GPR149Q86SP6 731 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 PRSS58Q8IYP2 241 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SLC7A13Q8TCU3 470 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 SPRYD4Q8WW59 207 aaPredicted RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 HAS2Q92819 552 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 FOXRED1Q96CU9 486 aaPredicted RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 CMKLR1Q99788 373 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 INPP5KQ9BT40 448 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 GORASP2Q9H8Y8 452 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 CLDND1Q9NY35 253 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 OSGIN1Q9UJX0 560 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
VCL-201ENST00000211998 LTBP3Q9NS15 1303 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 B4DGG1 531 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 NFKBIEO00221 500 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 BHLHE40O14503 412 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ERI3O43414 337 aaKnown RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 MMP20O60882 483 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 S1PR4O95977 384 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ADH1BP00325 375 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ADORA3P0DMS8 318 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 PFKLP17858 780 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 AK4P27144 223 aaPredicted RBP9.91□□□□□ -0.82
VCL-201ENST00000211998 GPR4P46093 362 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 TNFRSF17Q02223 184 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ALG10BQ5I7T1 473 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 C22orf39Q6P5X5 142 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 GKN2Q86XP6 184 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 RASGRP3Q8IV61 690 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ZNF679Q8IYX0 411 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 CLECL1Q8IZS7 167 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 FAM46BQ96A09 425 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ZBTB8AQ96BR9 441 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 C14orf79Q96F83 325 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SLC2A4RGQ9NR83 387 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SDHAF3Q9NRP4 125 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 FAM86C1Q9NVL1 165 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 EPHA6Q9UF33 1036 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 SPO11Q9Y5K1 396 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 ENPP4Q9Y6X5 453 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
VCL-201ENST00000211998 A0A087WZY1 265 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms