RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF773Q6PK81 442 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 VRK2Q86Y07 508 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF555Q8NEP9 628 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OR4C15Q8NGM1 316 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SGCDQ92629 289 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TSLPQ969D9 159 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CNPPD1Q9BV87 410 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ACER3Q9NUN7 267 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C3orf18Q9UK00 162 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RARRES3Q9UL19 164 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ERVK-19Q9WJR5 959 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 DTX4Q9Y2E6 619 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 M0R3H8 397 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 NKX2-2O95096 273 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GALNSP34059 522 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PGDP52209 483 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FUT7Q11130 342 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MEP1AQ16819 746 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PWWP2BQ6NUJ5 590 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 B3GNT8Q7Z7M8 397 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C12orf43Q96C57 262 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 VSTM2LQ96N03 204 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF578Q96N58 590 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PELOQ9BRX2 385 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SLC7A5P2Q9GIP4 190 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C11orf16Q9NQ32 467 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CHST2Q9Y4C5 530 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PCDHGB2Q9Y5G2 931 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LOC100130705A0A1B0GUX0 176 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MITFO75030 526 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 IGFBP5P24593 272 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GABRA3P34903 492 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LIMS1P48059 325 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CD47Q08722 323 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 DEF8Q6ZN54 512 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LMF2Q9BU23 707 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MTHFD2LQ9H903 347 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FOLH1BQ9HBA9 442 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SLC22A11Q9NSA0 550 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FBXO34Q9NWN3 711 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RHCGQ9UBD6 479 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CTSFQ9UBX1 484 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SLC9A8Q9Y2E8 581 aa18.29■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF701M0R085 212 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PRAMEF2O60811 474 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SCRG1O75711 98 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LDOC1O95751 146 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 HMGA2P52926 109 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ISL1P61371 349 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RHAGQ02094 409 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 NEDD8Q15843 81 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EXOC3L2Q2M3D2 409 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RBM48Q5RL73 367 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C6orf141Q5SZD1 244 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FAHD1Q6P587 224 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 COX15Q7KZN9 410 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OR6T1Q8NGN1 323 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OR52P1PQ8NH57 321 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 HDAC2Q92769 488 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 APMAPQ9HDC9 416 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MKKSQ9NPJ1 570 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OCIAD1Q9NX40 245 aa18.28■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GXYLT2A0PJZ3 443 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C17orf105B2RV13 164 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FLRT2O43155 660 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 STX11O75558 287 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GADD45GO95257 159 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EEF1B2P24534 225 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ACP1P24666 158 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RAD23AP54725 363 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RFX4Q33E94 735 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C16orf52Q8NHV5 167 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RHBDD1Q8TEB9 315 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PTPMT1Q8WUK0 201 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SAP130Q9H0E3 1048 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OR10A5Q9H207 317 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ADNPQ9H2P0 1102 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FTSJ1Q9UET6 329 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ACAD8Q9UKU7 415 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 KNTC1P50748 2209 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CENPVL1A0A0U1RR11 272 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SYT5O00445 386 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SLC16A6O15403 523 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 AK1P00568 194 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GP1BAP07359 652 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 AGXTP21549 392 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 DCKP27707 260 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PRKAR1BP31321 381 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 POU6F2P78424 691 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GPR68Q15743 365 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GPR107Q5VW38 600 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 XAF1Q6GPH4 301 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FIGNL1Q6PIW4 674 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GALNT5Q7Z7M9 940 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LAPTM4BQ86VI4 370 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PPP1R3BQ86XI6 285 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PRSS58Q8IYP2 241 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF615Q8N8J6 731 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ATG16L2Q8NAA4 619 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PHF10Q8WUB8 498 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms