RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PRKYO43930 277 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 OR10H2O60403 315 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 PLOD3O60568 738 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 ZIC2O95409 532 aaPredicted RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 RAB36O95755 333 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 DBIP07108 87 aaKnown RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 IFI6P09912 130 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 OCM2P0CE71 109 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 OCMP0CE72 109 aaPredicted RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 ATXN8OSP0DMR3 200 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SRFP11831 508 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 MYL12AP19105 171 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 FPR3P25089 353 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 S100A5P33763 92 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SOX6P35712 828 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 GIPRP48546 466 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SNRPNP63162 240 aaKnown RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 CDK5Q00535 292 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 DUSP8Q13202 625 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 ITGADQ13349 1161 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SMAD4Q13485 552 aaKnown RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 INAQ16352 499 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 DECR1Q16698 335 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 TMEM44Q2T9K0 475 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF836Q6ZNA1 936 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 Q6ZNX1 250 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 RASSF6Q6ZTQ3 369 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 PRSS41Q7RTY9 318 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 TMEFF1Q8IYR6 380 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 OR5T3Q8NGG3 340 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 ZG16BQ96DA0 208 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 COX4I2Q96KJ9 171 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SLC6A18Q96N87 628 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 OR5M11Q96RB7 305 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SDF2Q99470 211 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 LRRC61Q9BV99 259 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 POLR2J2Q9GZM3 115 aaKnown RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 C6orf62Q9GZU0 229 aaPredicted RBP7.71□□□□□ -1.17
VAMP3-201ENST00000054666 OR51E2Q9H255 320 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 MMP27Q9H306 513 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 FAIMQ9NVQ4 179 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 CNIH4Q9P003 139 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 SPTBN5Q9NRC6 3674 aaKnown RBP7.71□□□□□ -1.18
VAMP3-201ENST00000054666 AGAP5A6NIR3 686 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 KIAA0513O60268 411 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 RDH16O75452 317 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 SCG5P05408 212 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 ST6GAL1P15907 406 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 TRHRP34981 398 aaPredicted RBP7.71□□□□□ -1.18
VAMP3-201ENST00000054666 TGFBR1P36897 503 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 STAT5AP42229 794 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 PPP1CAP62136 330 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 ELOCQ15369 112 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 SPHARQ15513 63 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 DEFB110Q30KQ9 67 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 KLHL22Q53GT1 634 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 TRMT12Q53H54 448 aaKnown RBP7.71□□□□□ -1.18
VAMP3-201ENST00000054666 SYT14P1Q58G82 188 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 SLC25A30Q5SVS4 291 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 NIPAL1Q6NVV3 410 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 C11orf74Q86VG3 221 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 CENPSQ8N2Z9 138 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 CLIP4Q8N3C7 705 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 FRMD1Q8N878 549 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM163Q8TC26 289 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 GPR151Q8TDV0 419 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 OSTF1Q92882 214 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 PPP1R14BQ96C90 147 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 DSN1Q9H410 356 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 EGLN3Q9H6Z9 239 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 RHBDL2Q9NX52 303 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 MAT2BQ9NZL9 334 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 DAPK2Q9UIK4 370 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 CFL2Q9Y281 166 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 MRPS33Q9Y291 106 aaKnown RBP7.71□□□□□ -1.18
VAMP3-201ENST00000054666 PCDHGA3Q9Y5H0 932 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 A3GALT2U3KPV4 340 aa7.71□□□□□ -1.18
VAMP3-201ENST00000054666 METTL15A6NJ78 407 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SHISA7A6NL88 538 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SGK494L7N484 410 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CYR61O00622 381 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 ARHGAP33O14559 1287 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MAGEB3O15480 346 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PRODHO43272 600 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 DNAJB6O75190 326 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CSO75390 466 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SOX30O94993 753 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 BMP4P12644 408 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 GPR4P46093 362 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 OMPP47874 163 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 POU6F2P78424 691 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 HOXC5Q00444 222 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 ZNHIT3Q15649 155 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PRICKLE4Q2TBC4 344 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TRIM16LQ309B1 348 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CCNJQ5T5M9 372 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 FHL5Q5TD97 284 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 RNLSQ5VYX0 342 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms