RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Timm22Q9CQ85 194 aa14.9□□□□□ -0.02
Trim39-203ENSMUST00000113706 Timm50Q9D880 353 aa14.9□□□□□ -0.02
Trim39-203ENSMUST00000113706 Cpne6Q9Z140 557 aa14.9□□□□□ -0.02
Trim39-203ENSMUST00000113706 Slc25a34A2ADF7 318 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 TspearJ3S6Y1 670 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 P2ry2P35383 373 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Cdh26P59862 763 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ffar1Q76JU9 300 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Syt16Q7TN83 639 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Tas2r140Q7TQA4 312 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ncs1Q8BNY6 190 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Irak4Q8R4K2 459 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Fam136b-psA0A140T8T1 138 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Gm13539A0A1B0GSM6 183 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Olfr605E9Q838 314 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Shisa8J3QNX5 399 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 B3galt2O54905 422 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 FurinP23188 793 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Erp29P57759 262 aaKnown RBP14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Fahd2Q3TC72 313 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Xrra1Q3U3V8 786 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 A730061H03RikQ8BGD2 154 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Klhl26Q8BGY4 606 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Tmsb15lQ8C0W0 80 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Lgi4Q8K1S1 537 aa14.89□□□□□ -0.03
Trim39-203ENSMUST00000113706 Hpse2B2RY83 592 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Itga10E9Q6R1 1167 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Pcp2P12660 120 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 ArntP53762 791 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 GcgP55095 180 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 MocosQ14CH1 862 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Dmrtc1bQ2PMX6 267 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Trappc13Q3TIR1 417 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Pla2g7Q60963 440 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 MuskQ61006 868 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Snta1Q61234 503 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Galnt2Q6PB93 570 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Olfr1275Q7TQY8 312 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Olfr699Q7TRN3 316 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Vmn2r81Q80Z09 865 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Fam46bQ8C152 427 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Smap1Q91VZ6 440 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Slco2a1Q9EPT5 643 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ascl3Q9JJR7 174 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ptges3Q9R0Q7 160 aaKnown RBP14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Itgb6Q9Z0T9 787 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Frem2Q6NVD0 3160 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Olfr1095A3KPP7 308 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Mybpc1D3YU50 1127 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Gm20390E9PZF0 267 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Gm8237E9Q257 205 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Hsd3b6O35469 373 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Cdk5r2O35926 369 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Dok2O70469 412 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Serpine1P22777 402 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Nme2Q01768 152 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 SpicQ6P3D7 242 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 EndovQ8C9A2 338 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Slc35c2Q8VCX2 364 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Dbf4Q9QZ41 663 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ybx2Q9Z2C8 360 aaKnown RBP14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Zfp300A2AE21 645 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Cyp2j5O54749 501 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 H2-T23P06339 357 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 AboP38649 332 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Perm1Q149B8 807 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Fam20cQ5MJS3 579 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Smco1Q8CEZ1 214 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Lipt1Q8VCM4 373 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Fam32aQ9CR80 112 aaKnown RBP14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Naalad2Q9CZR2 740 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 9030624G23RikQ9D308 155 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Dennd6bQ9D9V7 585 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 Dclk1Q9JLM8 756 aa14.88□□□□□ -0.03
Trim39-203ENSMUST00000113706 FkbplO35450 347 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Phkg1P07934 388 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Foxk1P42128 719 aaKnown RBP14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Pyroxd2Q3U4I7 581 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Wdr20Q3UWE6 569 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 TxlngQ8BHN1 524 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Q8C0X8 640 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ubqln1Q8R317 582 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Olfr881Q8VF63 314 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Prb1Q91X93 504 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Popdc3Q9ES81 291 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Fkbp9Q9Z247 570 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Olfr1123A2AT85 323 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Zfp282E9PVC2 666 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ulk1O70405 1051 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Rrm2P11157 390 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 PrkacbP68181 351 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Tbc1d24Q3UUG6 561 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 1700012B07RikQ3V0S8 276 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Tas2r40Q7TQB8 319 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ptbp3Q8BHD7 523 aaKnown RBP14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Itih5Q8BJD1 952 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 ZxdcQ8C8V1 858 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Ly6g6eQ8K1T6 166 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Lrrc26Q91W20 331 aa14.87□□□□□ -0.03
Trim39-203ENSMUST00000113706 Mrgpra7Q91ZC5 305 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms