RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tex47Q9D5W8 253 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hspb11Q9D6H2 143 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1032A2ATE5 310 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tas2r123P59528 333 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tmem207P86045 143 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 MagixQ4KL35 324 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Snap91Q61548 901 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Polr2mQ6P6I6 366 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Syt16Q7TN83 639 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lpar4Q8BLG2 370 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Peli2Q8BST6 419 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lats1Q8BYR2 1129 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 1700020N01RikQ8CF20 87 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zdhhc1Q8R0N9 484 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zdhhc5Q8VDZ4 715 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Vmn2r45L7N2B5 852 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cntn1P12960 1020 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc35g3Q5F297 340 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Chil6Q80W26 440 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Creg2Q8BGC9 288 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rbm45Q8BHN5 476 aaKnown RBP11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mettl2Q8BMK1 389 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Steap2Q8BWB6 489 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gpr20Q8BYC4 358 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Sh2d5Q8JZW5 429 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc35c2Q8VCX2 364 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr340Q8VGL0 312 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Clec2fQ8VI21 196 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lrg1Q91XL1 342 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ist1Q9CX00 362 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Eif3kQ9DBZ5 218 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tomm20Q9DCC8 145 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tinf2Q9QXG9 341 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Vmn2r96E9PZU5 664 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr519K7N645 319 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tuba4aP68368 448 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gdi2Q61598 445 aaKnown RBP11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ppp3r2Q63811 179 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gabbr2Q80T41 940 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pdcd10Q8VE70 212 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lpcat2bQ9D5U0 516 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cldn8Q9Z260 225 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 A0A286YD17 136 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Fam84bD3YXJ5 310 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr730E9Q8M3 318 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc27a5Q4LDG0 689 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tas2r135Q7TQA9 312 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr744Q7TRM0 323 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc34a3Q80SU6 601 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Unc5dQ8K1S2 956 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Swsap1Q8VCI7 278 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Asb15Q8VHS6 583 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Dppa5aQ9CQS7 118 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gje1Q9CX92 205 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lrr1D3YY91 422 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr740E9PV79 311 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm6460F6YJZ8 199 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc16a5G5E8K6 468 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1133Q7TR44 313 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc38a9Q8BGD6 560 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Fbxw17Q8CFE8 466 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mnd1Q8K396 205 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr77Q8VEY9 312 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1432A0A140LHS7 346 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Skint10A7TZG1 354 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cdh19E9Q3A7 770 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm6465F7A7Y6 181 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Vmn2r99H3BK37 856 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Prl7a1O54830 266 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tssk2O54863 358 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 GzmcP08882 248 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Camk2bP28652 542 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 CckbrP56481 453 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hsd17b3P70385 305 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pak6Q3ULB5 682 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lingo2Q3URE9 606 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1045Q7TR80 315 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Clec18aQ7TSQ1 534 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mrps15Q9DC71 258 aaKnown RBP11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 BvesQ9ES83 358 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc9a3r2Q9JHL1 337 aa11.21□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zbtb34A2ATY4 518 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Btbd2E9PUS2 523 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn2r109K7N747 858 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gtf2h4O70422 463 aaKnown RBP11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P01648 108 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 NelfeP19426 375 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Klkb1P26262 638 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fv1P70213 459 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MybphP70402 483 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rps3aP97351 264 aaKnown RBP11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rnf223Q3UV31 285 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tas2r39Q7TQA5 319 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr503Q7TRU8 323 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn1r30Q8R2D2 302 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tpra1Q99MU1 369 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Nkiras2Q9CR56 191 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dlgap4B1AZP2 992 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Alox8O35936 677 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PthlhP22858 175 aa11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms