RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Hipk2Q9QZR5 1196 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zgrf1Q0VGT4 1863 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 CatP24270 527 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 CryaaP24622 196 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ptpn6P29351 595 aaKnown RBP10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sh2d1b2Q45HK4 132 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cdkn2dQ60773 166 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ptpn21Q62136 1176 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 ParpbpQ6IRT3 573 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr538Q7TRT5 310 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slitrk2Q810C0 846 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rhbdd3Q8BP97 385 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 NdnfQ8C119 568 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Hist1h2aaQ8CGP4 129 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr692Q8VF03 329 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cdhr1Q8VHP6 859 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 EdaraddQ8VHX2 208 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Med27Q9DB40 311 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tcte1A6H639 498 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm436B1AVU6 407 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Btbd16E9Q173 522 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Coq10aE9Q3H6 259 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tmem200cJ3QK46 637 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Dnajb3O35723 242 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr6P34986 316 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 QrfprP83861 433 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cds1P98191 461 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 JupQ02257 745 aaKnown RBP10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 A1bgQ19LI2 512 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ccdc69Q3TCJ8 202 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 EdnraQ61614 427 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 C5ar2Q8BW93 344 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Trmt10aQ8C1Z8 328 aaKnown RBP10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Acot7Q91V12 381 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 FancgQ9EQR6 623 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 AgtrapQ9WVK0 161 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Nup214Q80U93 2085 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Znf106O88466 1888 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Chst13D3Z6E3 336 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp54E9PW05 585 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Clk1P22518 483 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ube2e3P52483 207 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 GaltQ03249 379 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gdf9Q07105 441 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc30a1Q60738 503 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ostf1Q62422 215 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fblim1Q71FD7 375 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tas2r38Q7TQA6 331 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Hamp2Q80T19 83 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 SelenoiQ80TA1 398 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr1426Q8VG74 311 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 SdhcQ9CZB0 169 aaKnown RBP10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tspan4Q9DCK3 238 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 AireQ9Z0E3 552 aa10.72□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fam136b-psA0A140T8T1 138 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Esp22A8R0V4 111 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ccrl2O35457 360 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 NfkbieO54910 364 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tmprss11cQ1JRP2 431 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Znf354aQ61751 572 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Q8CF31 99 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Dusp7Q91Z46 422 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Lrch4Q921G6 680 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Mcoln1Q99J21 580 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 NaxdQ9CZ42 343 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp68Q9Z116 606 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Kiaa0100Q5SYL3 2234 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cfap77A0A087WRI3 283 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Nmur1O55040 428 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 F9P16294 471 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 UbqlnlQ14DL0 610 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tgfbr2Q62312 592 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Eid2Q6X7S9 236 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vwa2Q70UZ7 791 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ttc29Q80VM3 471 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gprin3Q8BWS5 763 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rbm34Q8C5L7 375 aaKnown RBP10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr700Q8VFM5 316 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tada1Q99LM9 335 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 MrgprhQ99MT8 321 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 L3hypdhQ9CXA2 354 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Mfsd2aQ9DA75 534 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 SpastQ9QYY8 614 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 PrknQ9WVS6 464 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Padi3Q9Z184 664 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr1032A2ATE5 310 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pgm2A2CEK3 580 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tceal7A3KGA4 98 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rd3lB2RV38 197 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp277E9Q6D6 583 aaKnown RBP10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ccdc149F6V035 524 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp141G3UY09 685 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Il13ra1O09030 424 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 F2rl3O88634 396 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tas2r7P59530 312 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Dnajc5P60904 198 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fam189a1Q6A044 515 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Q6P1I3 445 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Shkbp1Q6P7W2 704 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fbxl4Q8BH70 621 aa10.71□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms