RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cd302Q9DCG2 228 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Jph1Q9ET80 660 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Clec2iQ9WVF9 217 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Tgm7A2ART8 616 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Zfp472B0V2W5 534 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Stmn3O70166 180 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Mtx2O88441 263 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Ube2e3P52483 207 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Limk1P53668 647 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Mrpl10Q3TBW2 262 aaKnown RBP15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Dvl3Q61062 716 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Ptpn18Q61152 453 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Meig1Q61845 88 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Ostf1Q62422 215 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 CebpeQ6PZD9 281 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Slc43a1Q8BSM7 564 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Ppwd1Q8CEC6 646 aaKnown RBP15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Gatad2aQ8CHY6 629 aaKnown RBP15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Nmral1Q8K2T1 309 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Etv3Q8R4Z4 513 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Rab28Q99KL7 221 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Pfdn1Q9CWM4 122 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Khdrbs2Q9WU01 349 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm20547B8JJN0 1276 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm609E9Q573 300 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 CtssO70370 340 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 CfbP04186 761 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Ubl4aP21126 157 aaKnown RBP15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Nrg2P56974 756 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 SnrpgP62309 76 aaKnown RBP15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr629Q0VBH3 314 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 EndouQ3V188 412 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 CfiQ61129 603 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Slc22a12Q8CFZ5 553 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Dcun1d3Q8K0V2 304 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Fahd1Q8R0F8 227 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Tmem159Q922Z1 161 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Zbtb8aQ9CWH1 434 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 SdhcQ9CZB0 169 aaKnown RBP15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Slamf9Q9D780 285 aa15.48■□□□□ 0.07
Shh-201ENSMUST00000002708 Fam217bA2AJW5 387 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Znf382B2RXC5 579 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r55E9Q8I6 310 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Cd8aP01731 247 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Tcea1P10711 301 aaKnown RBP15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Hsd3b2P26149 373 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 RabggtbP53612 339 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 C1qaP98086 245 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Zfp974Q3UVF6 752 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Q8CF31 99 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 PpcsQ8VDG5 311 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Frs3Q91WJ0 492 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Sh3bp4Q921I6 962 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr459Q924H8 314 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Tlr1Q9EPQ1 795 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Tsga8Q9JJL0 238 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Rex2A2AWF2 685 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Adam34A2RSG8 714 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 PtprhE9Q0N2 971 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Slc27a6E9Q9W4 619 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Ntf3P20181 258 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Tas2r7P59530 312 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Dgcr2P98154 548 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Cyb5r4Q3TDX8 528 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Rnf223Q3UV31 285 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Dvl2Q60838 736 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr1101Q7TR59 310 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Carnmt1Q80UY1 400 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Zc3hc1Q80YV2 501 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Zfpm2Q8CCH7 1151 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Unc5dQ8K1S2 956 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Tmem106aQ8VC04 261 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Paip1Q8VE62 400 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr656Q8VGX9 329 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Pskh1Q91YA2 424 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Rpe65Q91ZQ5 533 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Dcbld2Q91ZV3 769 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Pcyt2Q922E4 404 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Cfap54Q8C6S9 3106 aa15.47■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm20695H3BLK7 282 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 NlkO54949 527 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Rdh5O55240 318 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Smpd2O70572 419 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Syn1O88935 706 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 P18533 117 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Fabp7P51880 132 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Dcp1bQ3U564 578 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Sgk494Q5SYL1 278 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Bnc2Q8BMQ3 1127 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Slc15a3Q8BPX9 578 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr1467Q8VFW1 308 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr599Q8VG01 315 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 MrgprhQ99MT8 321 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Ppil3Q9D6L8 161 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Upf1Q9EPU0 1124 aaKnown RBP15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Lhx9Q9WUH2 397 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr1032A2ATE5 310 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr605E9Q838 314 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Chst3O88199 472 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Mtnd2P03893 345 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms