RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SLC2A2P11168 524 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 GSTM3P21266 225 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 TRIM23P36406 574 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 P2RY2P41231 377 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 OMPP47874 163 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 KHKP50053 298 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 FZD5Q13467 585 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 TMEM52BQ4KMG9 183 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF311Q5JNZ3 666 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 PRR23CQ6ZRP0 262 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 LINC00471Q8N535 108 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 OR2A1Q8NGT9 310 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 SLC38A1Q9H2H9 487 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 NT5DC2Q9H857 520 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 GSTK1Q9Y2Q3 226 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 TRDV1A0A1B0GX56 115 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 CENPBD1B2RD01 187 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 FCMRO60667 390 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ZIC2O95409 532 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 THY1P04216 161 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 PSKH1P11801 424 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ACP5P13686 325 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 DRD2P14416 443 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 BCL6P41182 706 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 AVPR1BP47901 424 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 CDH11P55287 796 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 CDK3Q00526 305 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 PRDX1Q06830 199 aaKnown RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 TSPAN31Q12999 210 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ELAVL3Q14576 367 aaKnown RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 DUSP6Q16828 381 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 DEFB115Q30KQ5 88 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF791Q3KP31 576 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 YIF1BQ5BJH7 314 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 AADACL4Q5VUY2 407 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 VASNQ6EMK4 673 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 KIAA1161Q6NSJ0 714 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 SIMC1Q8NDZ2 872 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 GNPDA2Q8TDQ7 276 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 DIO2Q92813 273 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 INSM2Q96T92 566 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 SPATA5L1Q9BVQ7 753 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ISYNA1Q9NPH2 558 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 CLCA2Q9UQC9 943 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 EXOSC1Q9Y3B2 195 aaKnown RBP12.97□□□□□ -0.33
PHGDH-233ENST00000642021 ASB4Q9Y574 426 aa12.97□□□□□ -0.33
PHGDH-233ENST00000642021 MYO10Q9HD67 2058 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 NUMA1Q14980 2115 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 A0A0G2JPF8 293 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 IGLON5A6NGN9 336 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 YES1P07947 543 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 FAM157BP0CG42 384 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 UBL4AP11441 157 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 ALAS2P22557 587 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF234Q14588 700 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 QPRTQ15274 297 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 WSCD2Q2TBF2 565 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 LCN1P1Q5VSP4 162 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 YIPF7Q8N8F6 280 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 TMEM145Q8NBT3 493 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 AP3S1Q92572 193 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 KIAA1143Q96AT1 154 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-233ENST00000642021 FERD3LQ96RJ6 166 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 PINK1Q9BXM7 581 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 PRDM7Q9NQW5 492 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 NLKQ9UBE8 527 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 OR1A2Q9Y585 309 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 MAU2Q9Y6X3 613 aa12.96□□□□□ -0.33
PHGDH-233ENST00000642021 EDDM13A0A1B0GTR0 161 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 CARNS1A5YM72 827 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 OR6C70A6NIJ9 312 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 CD8B2A6NJW9 211 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.34
PHGDH-233ENST00000642021 CLEC3AO75596 197 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 CD8BP10966 210 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 NTSP30990 170 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-233ENST00000642021 MAP2K3P46734 347 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 EVX1P49640 407 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 CTBP2P56545 445 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 GALK2Q01415 458 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 SLC9A5Q14940 896 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 PLET1Q6UQ28 207 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 RASSF6Q6ZTQ3 369 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 MARCH9Q86YJ5 346 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 POGLUT1Q8NBL1 392 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 WFIKKN2Q8TEU8 576 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 OR7D2Q96RA2 312 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 PCBD2Q9H0N5 130 aa12.96□□□□□ -0.34
PHGDH-233ENST00000642021 C6orf106Q9H6K1 298 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-233ENST00000642021 MBNL1Q9NR56 388 aaKnown RBP12.96□□□□□ -0.34
PHGDH-233ENST00000642021 GIMAP4Q9NUV9 329 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms