RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 PERM1Q5SV97 790 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 MLIPQ5VWP3 458 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TCTN3Q6NUS6 607 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TBPL2Q6SJ96 375 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 FRRS1Q6ZNA5 592 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 RANBP3LQ86VV4 465 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TSPYL5Q86VY4 417 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 PPP1R3BQ86XI6 285 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 SLITRK4Q8IW52 837 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 OFCC1Q8IZS5 231 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 DEPDC4Q8N2C3 294 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 AGBL5Q8NDL9 886 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 OR10Q1Q8NGQ4 319 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 GPR151Q8TDV0 419 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 CDS1Q92903 461 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 OTUB1Q96FW1 271 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 FBXL20Q96IG2 436 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 PTCHD1Q96NR3 888 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 YIPF4Q9BSR8 244 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 FNDC11Q9BVV2 318 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 GTPBP2Q9BX10 602 aaKnown RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 FOLH1BQ9HBA9 442 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 VCX3AQ9NNX9 186 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 PAPOLBQ9NRJ5 636 aaKnown RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ACER3Q9NUN7 267 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TMEFF2Q9UIK5 374 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 NXT1Q9UKK6 140 aaKnown RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF443Q9Y2A4 671 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TESMINQ9Y4I5 508 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 U3KQV3 271 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ASXL3Q9C0F0 2248 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 SEC16AO15027 2179 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 SCN2AQ99250 2005 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 SPTBP11277 2137 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 IGKV3D-11A0A0A0MRZ8 115 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 A0A1W2PQM1 296 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 A0A1W2PS29 197 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 TCRBV16S1A1N1A0A5B0 115 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 A8MU76 341 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 D6RAR5 112 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 H3BNH8 94 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 BCKDKO14874 412 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 GALR2O43603 387 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 MPZL2O60487 215 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 FOXD2O60548 495 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 DNAJB6O75190 326 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 OR5F1O95221 314 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 MED26O95402 600 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 CLPTM1O96005 669 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 FGF5P12034 268 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 NID1P14543 1247 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 GSTM3P21266 225 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 S1PR1P21453 382 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 AGXTP21549 392 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 TTKP33981 857 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 GABRA3P34903 492 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 OR1E2P47887 323 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 DAPP51397 102 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 IST1P53990 364 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 UGT2B15P54855 530 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 RGS8P57771 180 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 GABARAPL2P60520 117 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 ESRRGP62508 458 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 MAT1AQ00266 395 aaKnown RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 E2F1Q01094 437 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 CHRNEQ04844 493 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 PUM1Q14671 1186 aaKnown RBP eCLIP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 KCNAB1Q14722 419 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 TRAM2Q15035 370 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 PLA2G2CQ5R387 149 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF691Q5VV52 312 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 TYW3Q6IPR3 259 aaKnown RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 GRAMD2AQ8IUY3 354 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF440Q8IYI8 595 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 MORN4Q8NDC4 146 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 C17orf47Q8NEP4 570 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 HDAC2Q92769 488 aaKnown RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 SLC38A4Q969I6 547 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 CCDC74BQ96LY2 380 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 VSTM2LQ96N03 204 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 LRFN5Q96NI6 719 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 ALPK1Q96QP1 1244 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 PITX2Q99697 317 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 YIPF2Q9BWQ6 316 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 DGCR6LQ9BY27 220 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 GRIP2Q9C0E4 1043 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 OR10A5Q9H207 317 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 NMNAT1Q9HAN9 279 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 SMURF2Q9HAU4 748 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 HHATLQ9HCP6 504 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 SIDT1Q9NXL6 827 aaKnown RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 VNN3Q9NY84 501 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 UBAP1Q9NZ09 502 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 TMEM9Q9P0T7 183 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 COPS7AQ9UBW8 275 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms