RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 DGKQP52824 942 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 KCNJ2P63252 427 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 ELOAQ14241 798 aaKnown RBP24.44■■□□□ 1.5
VEGFA-231ENST00000640499 BNC2Q6ZN30 1099 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-231ENST00000640499 ANKRD46Q86W74 232 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 CLEC4FQ8N1N0 589 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 OTUB1Q96FW1 271 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-231ENST00000640499 GALNT9Q9HCQ5 603 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 OR10H1Q9Y4A9 318 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 SNX8Q9Y5X2 465 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 GTF3C1Q12789 2109 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 C2orf72A6NCS6 295 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 E9PBE3 544 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 ICOSLGO75144 302 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 PDE9AO76083 593 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 HMGN2P05204 90 aaKnown RBP24.43■■□□□ 1.5
VEGFA-231ENST00000640499 CLNS1AP54105 237 aaKnown RBP24.43■■□□□ 1.5
VEGFA-231ENST00000640499 PNLIPRP2P54317 469 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 DUSP5Q16690 384 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 FAM174BQ3ZCQ3 159 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 PDCD4Q53EL6 469 aaKnown RBP24.43■■□□□ 1.5
VEGFA-231ENST00000640499 TBCELQ5QJ74 424 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 CDRT4Q8N9R6 151 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 FBXO30Q8TB52 745 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 ZNF703Q9H7S9 590 aaPredicted RBP24.43■■□□□ 1.5
VEGFA-231ENST00000640499 SDR39U1Q9NRG7 319 aaPredicted RBP24.43■■□□□ 1.5
VEGFA-231ENST00000640499 ERRFI1Q9UJM3 462 aaPredicted RBP24.43■■□□□ 1.5
VEGFA-231ENST00000640499 LIPGQ9Y5X9 500 aa24.43■■□□□ 1.5
VEGFA-231ENST00000640499 PRSS51A0A1B0GVH4 220 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 B4DXG7 233 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 EDF1O60869 148 aaKnown RBP24.42■■□□□ 1.5
VEGFA-231ENST00000640499 SNX4O95219 450 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 C1QCP02747 245 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 CYP4B1P13584 511 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 IDO1P14902 403 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 AQP5P55064 265 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 PSPHP78330 225 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 SZRD1Q7Z422 152 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 SLC22A16Q86VW1 577 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 FAM109AQ8N4B1 249 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 OR5AK3PQ8NH89 298 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 FAM110BQ8TC76 370 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 RTN4RQ9BZR6 473 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 Q9N2J8 555 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 COL12A1Q99715 3063 aa24.42■■□□□ 1.5
VEGFA-231ENST00000640499 A0A1B0GTH9 108 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 TTC36A6NLP5 189 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 C17orf51A8MQB3 221 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 UBDO15205 165 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 CFLARO15519 480 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 ATP8B1O43520 1251 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 ABCB7O75027 752 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 IL33O95760 270 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 MAN2A2P49641 1150 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 GAS1P54826 345 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 MRPS22P82650 360 aaKnown RBP24.41■■□□□ 1.5
VEGFA-231ENST00000640499 PRR5P85299 388 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 UBAP2LQ14157 1087 aaKnown RBP24.41■■□□□ 1.5
VEGFA-231ENST00000640499 LASP1Q14847 261 aaKnown RBP24.41■■□□□ 1.5
VEGFA-231ENST00000640499 ZCCHC12Q6PEW1 402 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 Q6ZPB1 254 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-231ENST00000640499 GHDCQ8N2G8 530 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 FAM26EQ8N5C1 309 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 SFXN5Q8TD22 340 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 GPR151Q8TDV0 419 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 SLC9A6Q92581 669 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 TMEM41AQ96HV5 264 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 JSRP1Q96MG2 331 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-231ENST00000640499 GNRHR2Q96P88 292 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 UBQLN3Q9H347 655 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 SERHL2Q9H4I8 314 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 METTL7AQ9H8H3 244 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 NEUROD4Q9HD90 331 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 FBXO34Q9NWN3 711 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 BOKQ9UMX3 212 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-231ENST00000640499 KCNE3Q9Y6H6 103 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 FREM3P0C091 2139 aa24.41■■□□□ 1.5
VEGFA-231ENST00000640499 PRAMEF25A6NGN4 478 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 FADS1O60427 444 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 IGHG3P01860 377 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 S100A3P33764 101 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 RPP38P78345 283 aaKnown RBP24.4■■□□□ 1.5
VEGFA-231ENST00000640499 SNTA1Q13424 505 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 EFR3AQ14156 821 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 ZNHIT3Q15649 155 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-231ENST00000640499 GSTA3Q16772 222 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 SLC30A6Q6NXT4 461 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 ZAR1Q86SH2 424 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 SPPL2CQ8IUH8 684 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 WDSUB1Q8N9V3 476 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 OR9I1Q8NGQ6 314 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 TMCO6Q96DC7 493 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 THOC1Q96FV9 657 aaKnown RBP24.4■■□□□ 1.5
VEGFA-231ENST00000640499 RMND5BQ96G75 393 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-231ENST00000640499 CCDC28BQ9BUN5 200 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 MED4Q9NPJ6 270 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 TCF7L2Q9NQB0 619 aa24.4■■□□□ 1.5
VEGFA-231ENST00000640499 DNAJC13O75165 2243 aa24.39■■□□□ 1.5
VEGFA-231ENST00000640499 ACOT7O00154 380 aa24.39■■□□□ 1.49
VEGFA-231ENST00000640499 CDC40O60508 579 aaKnown RBP eCLIP24.39■■□□□ 1.492e-13■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms