RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	FARSA	Q9Y285	508 aa	Known RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	SMIM28	A0A1B0GU29	152 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	TRABD2B	A6NFA1	517 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	TRIM77	I1YAP6	450 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	GATC	O43716	136 aa	Known RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	MAFK	O60675	156 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	EGF	P01133	1207 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	NR2C1	P13056	603 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	RPS27A	P62979	156 aa	Known RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	UBA52	P62987	128 aa	Known RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	FABP9	Q0Z7S8	132 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	IRF5	Q13568	498 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	VEZF1	Q14119	521 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	TARBP2	Q15633	366 aa	Known RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	SUSD1	Q6UWL2	747 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	PRSS45	Q7RTY3	260 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	ACBD7	Q8N6N7	88 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	OR5D16	Q8NGK9	328 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	OR10R2	Q8NGX6	335 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	UROC1	Q96N76	676 aa		10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895	MRPS30	Q9NP92	439 aa	Known RBP	10.75	□□□□□ -0.69
SPIN3-231	ENST00000639895		A0A1B0GV50	99 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	AGAP14	A8MT82	685 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	GSTM3	P21266	225 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	EIF5A	P63241	154 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	RHEB	Q15382	184 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	CERS6	Q6ZMG9	384 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	C16orf59	Q7L2K0	433 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	AVL9	Q8NBF6	648 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	FAM98A	Q8NCA5	519 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	BVES	Q8NE79	360 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	DUSP18	Q8NEJ0	188 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	OR7D4	Q8NG98	312 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	OR4F15	Q8NGB8	312 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	STK35	Q8TDR2	534 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	APIP	Q96GX9	242 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	TSGA13	Q96PP4	275 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	PIGQ	Q9BRB3	760 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	ZNF649	Q9BS31	505 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	CHRD	Q9H2X0	955 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	PIGM	Q9H3S5	423 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	GJD2	Q9UKL4	321 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SH2B3	Q9UQQ2	575 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	AK6	Q9Y3D8	172 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	COL5A3	P25940	1745 aa	Predicted RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	STRC	Q7RTU9	1775 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	TRAPPC13	A5PLN9	417 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	FAAH	O00519	579 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SPP1	P10451	314 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SNRPB	P14678	240 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	RHOQ	P17081	205 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	AHCY	P23526	432 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	RPS26	P62854	115 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	CACNG1	Q06432	222 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	BATF	Q16520	125 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	C14orf28	Q4W4Y0	310 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	LAIR2	Q6ISS4	152 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	REEP3	Q6NUK4	255 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	C3orf33	Q6P1S2	294 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	KCT2	Q8NC54	265 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SCAMP5	Q8TAC9	235 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	PITX2	Q99697	317 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	DLL4	Q9NR61	685 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SMCO4	Q9NRQ5	59 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	ADARB2	Q9NS39	739 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	NDUFB11	Q9NX14	153 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	CTSF	Q9UBX1	484 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	DERA	Q9Y315	318 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	NUP205	Q92621	2012 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	HSD3B1	P14060	373 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SDC1	P18827	310 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	CPT2	P23786	658 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	RBMS1	P29558	406 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	AHR	P35869	848 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	ART1	P52961	327 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	SNTB1	Q13884	538 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	NDUFA9	Q16795	377 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	PRPF38B	Q5VTL8	546 aa	Known RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	UNC5D	Q6UXZ4	953 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	OR4K5	Q8NGD3	323 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	GPR152	Q8TDT2	470 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	HAVCR1	Q96D42	359 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	NMUR1	Q9HB89	426 aa		10.74	□□□□□ -0.69
SPIN3-231	ENST00000639895	COL1A2	P08123	1366 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	TMEM200C	A6NKL6	621 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	RIIAD1	A6NNX1	92 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	SMIM6	P0DI80	62 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	NME1	P15531	152 aa	Known RBP	10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	SHC1	P29353	583 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	CSF2RB	P32927	897 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	RPL4	P36578	427 aa	Known RBP	10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	ADH7	P40394	386 aa		10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	CDKN1C	P49918	316 aa	Predicted RBP	10.73	□□□□□ -0.69
SPIN3-231	ENST00000639895	LILRA4	P59901	499 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms