RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MUC13Q9H3R2 512 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 LRRC19Q9H756 370 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 PCDH18Q9HCL0 1135 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DMAC2Q9NW81 257 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3□□□□□ -1.93
CCDC7-213ENST00000639290 SAE1Q9UBE0 346 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 IL20RAQ9UHF4 553 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ZDHHC2Q9UIJ5 367 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MYO6Q9UM54 1294 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 C15orf41Q9Y2V0 281 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DTNAQ9Y4J8 743 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 E7EVH7 732 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 I6L893 689 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 BIN1O00499 593 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DNPH1O43598 174 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 CCNDBP1O95273 360 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MED26O95402 600 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 LY6G6CO95867 125 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 AHSGP02765 367 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 RHOXF2BP0C7M4 288 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ACP2P11117 423 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 IGLL1P15814 213 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MCM3P25205 808 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 GDF1P27539 372 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MAGEA1P43355 309 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DNASE1L1P49184 302 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 B3GALT5-AS1P59052 145 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 RPP30P78346 268 aaKnown RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 TEKQ02763 1124 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TRAF2Q12933 501 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 CTBP1Q13363 440 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 BMPR2Q13873 1038 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 SLC1A5Q15758 541 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ANKRD20A8PQ5CZ79 823 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF628Q5EBL2 1059 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 EEF1AKMT2Q5JPI9 291 aaKnown RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 HLA-DQA1Q5Y7H0 255 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 FIP1L1Q6UN15 594 aaKnown RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 UNQ9370/PRO34162Q6UXP9 181 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 RFLNAQ6ZTI6 216 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TRIM73Q86UV7 250 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TBC1D21Q8IYX1 336 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 C17orf53Q8N3J3 647 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 METTL27Q8N6F8 245 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 NETO2Q8NC67 525 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 NFKBIDQ8NI38 313 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ATG4AQ8WYN0 398 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF503Q96F45 646 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF764Q96H86 408 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 HIST1H2AHQ96KK5 128 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TCEANC2Q96MN5 208 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 HIST1H2AJQ99878 128 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 FUZQ9BT04 418 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MS4A7Q9GZW8 240 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 RNF122Q9H9V4 155 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 BRF2Q9HAW0 419 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MMP26Q9NRE1 261 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ADPRHL2Q9NX46 363 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TRIM10Q9UDY6 481 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 HSF4Q9ULV5 492 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MRPS18CQ9Y3D5 142 aaKnown RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 SLC22A20A6NK97 555 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 SLC16A5O15375 505 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 AKR1B10O60218 316 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 FMO6PO60774 539 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 OR6B1O95007 311 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 AP2A1O95782 977 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 MT-CYBP00156 380 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 PABPC4LP0CB38 370 aaKnown RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 MAGP20916 626 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 MMP8P22894 467 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 FASP25445 335 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 RFC1P35251 1148 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 SLC6A9P48067 706 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 PTDSS1P48651 473 aaKnown RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 CYP2J2P51589 502 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 AIF1P55008 147 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 RPS3AP61247 264 aaKnown RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 LMO4P61968 165 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 RPP38P78345 283 aaKnown RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 IL1RL1Q01638 556 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 PPIDQ08752 370 aaKnown RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 CUL2Q13617 745 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 NFE2L1Q14494 772 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 SLMAPQ14BN4 828 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 CARTPTQ16568 116 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF674Q2M3X9 581 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 FAM69AQ5T7M9 428 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 RAB12Q6IQ22 244 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 Q6YL49 198 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 IKBIPQ70UQ0 350 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 CNEP1R1Q8N9A8 125 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 APCDD1LQ8NCL9 501 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 TBC1D15Q8TC07 691 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 UTP15Q8TED0 518 aaKnown RBP2.99□□□□□ -1.93
CCDC7-213ENST00000639290 HEXDCQ8WVB3 486 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 TTC25Q96NG3 672 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 RASL10BQ96S79 203 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF416Q9BWM5 594 aa2.99□□□□□ -1.93
CCDC7-213ENST00000639290 FKRPQ9H9S5 495 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms