RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	GIP	P09681	153 aa	Predicted RBP	10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	ENG	P17813	658 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	CXCL2	P19875	107 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	S100A3	P33764	101 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	IRS1	P35568	1242 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	RFX3	P48380	749 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	MC2R	Q01718	297 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	SGCA	Q16586	387 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	RFTN2	Q52LD8	501 aa	Predicted RBP	10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	LIPK	Q5VXJ0	399 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	TPGS1	Q6ZTW0	290 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	USP53	Q70EK8	1073 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	VTCN1	Q7Z7D3	282 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	PIANP	Q8IYJ0	282 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	HS6ST3	Q8IZP7	471 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	APCDD1	Q8J025	514 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	SPIC	Q8N5J4	248 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	TTC16	Q8NEE8	873 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	FAM71C	Q8NEG0	241 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	OR5M9	Q8NGP3	310 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	OR52P1P	Q8NH57	321 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	WFDC5	Q8TCV5	224 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	SH3RF2	Q8TEC5	729 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	TCF25	Q9BQ70	676 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	GSDMC	Q9BYG8	508 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	BTBD1	Q9H0C5	482 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	MTIF3	Q9H2K0	278 aa	Known RBP	10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	ASB8	Q9H765	288 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	BPIFA1	Q9NP55	256 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	SLAMF7	Q9NQ25	335 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	SERHL	Q9NQF3	203 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	NUDT15	Q9NV35	164 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	MALT1	Q9UDY8	824 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	NDOR1	Q9UHB4	597 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	SLC6A14	Q9UN76	642 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	CCL27	Q9Y4X3	112 aa		10.15	□□□□□ -0.78
CHD2-223	ENST00000636306	TRBV5-4	A0A0C4DH59	114 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ANXA2P2	A6NMY6	339 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	HMSD	A8MTL9	139 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	TEX46	H3BTG2	121 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	LCMT2	O60294	686 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	KDM4B	O94953	1096 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CBSL	P0DN79	551 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	DRD2	P14416	443 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	GABRA1	P14867	456 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	NFYA	P23511	347 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PTPN6	P29350	595 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	HOXA6	P31267	233 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CTNNB1	P35222	781 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CBS	P35520	551 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	HTR6	P50406	440 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CAPZA1	P52907	286 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	KIAA1024L	P59773	190 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	RAP2B	P61225	183 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	POLR2L	P62875	67 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	KCNJ10	P78508	379 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	NFATC2	Q13469	925 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SNTB1	Q13884	538 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	TRAM2	Q15035	370 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	VASN	Q6EMK4	673 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CD200R1L	Q6Q8B3	271 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	TPRG1	Q6ZUI0	275 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PRICKLE2	Q7Z3G6	844 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SERPINA9	Q86WD7	417 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	LAS2	Q8IYD9	372 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	LGI4	Q8N135	537 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ARMC10	Q8N2F6	343 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SIDT2	Q8NBJ9	832 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	OR56B4	Q8NH76	319 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ORAI1	Q96D31	301 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ELMOD3	Q96FG2	381 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	TMEM41A	Q96HV5	264 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SPRTN	Q9H040	489 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ENAM	Q9NRM1	1142 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	NDUFAF4	Q9P032	175 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	MIOX	Q9UGB7	285 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CLEC2D	Q9UHP7	191 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	MED16	Q9Y2X0	877 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SF3B6	Q9Y3B4	125 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ANKRD12	Q6UB98	2062 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	IRGM	A1A4Y4	181 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ARHGEF33	A8MVX0	844 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CASK	O14936	926 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SUV39H1	O43463	412 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	KCNK5	O95279	499 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	POP4	O95707	220 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	POU2F2	P09086	479 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PRSS56	P0CW18	603 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ACR	P10323	421 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	FOLR2	P14207	255 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	GPX2	P18283	190 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ACRV1	P26436	265 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	MAPK3	P27361	379 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	RBMS1	P29558	406 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	S100A11	P31949	105 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CD70	P32970	193 aa		10.14	□□□□□ -0.79

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