RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 KRT4P19013 534 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 GRK2P25098 689 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 MC3RP41968 323 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 CLK3P49761 638 aaKnown RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 PSMD4P55036 377 aaKnown RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 DLX5P56178 289 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 CT45A2Q5DJT8 189 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 DCST1Q5T197 706 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 FBXW10Q5XX13 1052 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 FAM71E1Q6IPT2 247 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 TMEM107Q6UX40 140 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 NPSR1Q6W5P4 371 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 CHMP1BQ7LBR1 199 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 TRIM46Q7Z4K8 759 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 TRIM42Q8IWZ5 723 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 EPS8L3Q8TE67 593 aaKnown RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.31■□□□□ 0.2
PNKP-225ENST00000636214 C11orf24Q96F05 449 aaPredicted RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 METTL2AQ96IZ6 378 aaKnown RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 ZFP3Q96NJ6 502 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 TM9SF2Q99805 663 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 POLDIP3Q9BY77 421 aaKnown RBP16.31■□□□□ 0.2
PNKP-225ENST00000636214 ACBD3Q9H3P7 528 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 Q9N2J8 555 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 PPP4R1LQ9P1A2 415 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 EDARQ9UNE0 448 aa16.31■□□□□ 0.2
PNKP-225ENST00000636214 MED13LQ71F56 2210 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 A0A087WV62 115 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 MBD3L4A6NDZ8 208 aaPredicted RBP16.3■□□□□ 0.2
PNKP-225ENST00000636214 MBD3L3A6NE82 208 aaPredicted RBP16.3■□□□□ 0.2
PNKP-225ENST00000636214 MBD3L5A6NJ08 208 aaPredicted RBP16.3■□□□□ 0.2
PNKP-225ENST00000636214 SLC28A1O00337 649 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 SCO2O43819 266 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 TSPAN2O60636 221 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 TMIGD3P0DMS9 266 aaPredicted RBP16.3■□□□□ 0.2
PNKP-225ENST00000636214 NEFHP12036 1026 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 CD1EP15812 388 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 GPC1P35052 558 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 ZNF136P52737 540 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 SNTB1Q13884 538 aaKnown RBP16.3■□□□□ 0.2
PNKP-225ENST00000636214 DECR1Q16698 335 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 CYP27C1Q4G0S4 372 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 FLYWCH1Q4VC44 716 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 NOXRED1Q6NXP6 359 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 MBD3L2Q8NHZ7 208 aaPredicted RBP16.3■□□□□ 0.2
PNKP-225ENST00000636214 NTNG2Q96CW9 530 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 C3orf14Q9HBI5 128 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 SDHAF3Q9NRP4 125 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 C1orf109Q9NX04 203 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 CRIM1Q9NZV1 1036 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 CBLCQ9ULV8 474 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 FIS1Q9Y3D6 152 aa16.3■□□□□ 0.2
PNKP-225ENST00000636214 C2CD3Q4AC94 2353 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 KDM4EB2RXH2 506 aaPredicted RBP16.29■□□□□ 0.2
PNKP-225ENST00000636214 AZIN1O14977 448 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 PDPK1O15530 556 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 NME6O75414 186 aaPredicted RBP16.29■□□□□ 0.2
PNKP-225ENST00000636214 IL18BPO95998 194 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 CPN1P15169 458 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
PNKP-225ENST00000636214 DPP4P27487 766 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 EVI2BP34910 448 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 CPA2P48052 419 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 RFX3P48380 749 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 FBXL19-AS1Q494R0 122 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 CLEC6AQ6EIG7 209 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 OR5M10Q6IEU7 315 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 LRRN4CLQ8ND94 238 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 GOT1L1Q8NHS2 421 aaPredicted RBP16.29■□□□□ 0.2
PNKP-225ENST00000636214 ZFP28Q8NHY6 868 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 FAM222BQ8WU58 562 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 SH3GL2Q99962 352 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 TUBA1CQ9BQE3 449 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 TRMOQ9BU70 441 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 GLIPR2Q9H4G4 154 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 LRTM1Q9HBL6 345 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 TAS2R7Q9NYW3 318 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 FBXL2Q9UKC9 423 aa16.29■□□□□ 0.2
PNKP-225ENST00000636214 C19orf53Q9UNZ5 99 aaPredicted RBP16.29■□□□□ 0.2
PNKP-225ENST00000636214 HIVEP1P15822 2718 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 TUBAL3A6NHL2 446 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 TTC36A6NLP5 189 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 PLOD2O00469 737 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 DDX5P17844 614 aaKnown RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 POU3F2P20265 443 aaPredicted RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 CHMP24386 653 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 AGFG1P52594 562 aaKnown RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 DSCR4P56555 118 aaPredicted RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 SH2D5Q6ZV89 423 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 P4HA3Q7Z4N8 544 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 GRAMD2AQ8IUY3 354 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 C9orf106Q8NAJ2 232 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 OR4N2Q8NGD1 307 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 RMND5BQ96G75 393 aaPredicted RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 AMDHD1Q96NU7 426 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 GPATCH1Q9BRR8 931 aaKnown RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 SFXN3Q9BWM7 321 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms