RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	LCN1P1	Q5VSP4	162 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR56A3	Q8NH54	315 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CCL4L1	Q8NHW4	92 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PMM1	Q92871	262 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PIP5K1A	Q99755	562 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	B3GNT4	Q9C0J1	378 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	GNG8	Q9UK08	70 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	IFT52	Q9Y366	437 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TP53I11	O14683	189 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SP9	P0CG40	484 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CCR5	P51681	352 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RAB25	P57735	213 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	GABRE	P78334	506 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC5A12	Q1EHB4	618 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ALG10B	Q5I7T1	473 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997		Q6ZSR9	355 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	VWA5B2	Q8N398	1253 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	KLHL36	Q8N4N3	616 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CYB561A3	Q8NBI2	242 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR9Q2	Q8NGE9	314 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MAPKAP1	Q9BPZ7	522 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZNF831	Q5JPB2	1677 aa		13.51	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CLEC3A	O75596	197 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	IGHE	P01854	428 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CSN2	P05814	226 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PCSK6	P29122	969 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	HBA1	P69905	142 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SNTA1	Q13424	505 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC27A4	Q6P1M0	643 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZNF765	Q7L2R6	523 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZNF550	Q7Z398	422 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PACRGL	Q8N7B6	248 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	S100Z	Q8WXG8	99 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PROM1	O43490	865 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SFTPD	P35247	375 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MAP3K8	P41279	467 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SMU1	Q2TAY7	513 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ANKDD1A	Q495B1	522 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	UGT2A3	Q6UWM9	527 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SHF	Q7M4L6	423 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	JAGN1	Q8N5M9	183 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC5A8	Q8N695	610 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	IQCF1	Q8N6M8	205 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	G6PC3	Q9BUM1	346 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	NANS	Q9NR45	359 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SRCAP	Q6ZRS2	3230 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	FAM171A2	A8MVW0	826 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ACOT7	O00154	380 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	UBFD1	O14562	309 aa	Known RBP	13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC25A24	Q6NUK1	477 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TMEM64	Q6YI46	380 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RETREG3	Q86VR2	466 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	NRM	Q8IXM6	262 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZFP41	Q8N8Y5	198 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR5K2	Q8NHB8	316 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	AASS	Q9UDR5	926 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MGAT4B	Q9UQ53	548 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ADAMTSL1	Q8N6G6	1762 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	KRBA1	A5PL33	1030 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997		M0R129	80 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RBMXL2	O75526	392 aa	Known RBP	13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MT-CO3	P00414	261 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	HSD11B1	P28845	292 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RORA	P35398	523 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SRY	Q05066	204 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RCAN2	Q14206	197 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CHCHD4	Q8N4Q1	142 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC29A1	Q99808	456 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TIMM29	Q9BSF4	260 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	DCSTAMP	Q9H295	470 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CNIH4	Q9P003	139 aa		13.5	□□□□□ -0.25
NEDD4L-238	ENST00000635997	VSTM5	A8MXK1	200 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	DDC	P20711	480 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC6A6	P31641	620 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TSPAN5	P62079	268 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MAP4K2	Q12851	820 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MAPK14	Q16539	360 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OLIG3	Q7RTU3	272 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PELI2	Q9HAT8	420 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	POLE4	Q9NR33	117 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	B4GALT7	Q9UBV7	327 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PATE3	B3GLJ2	98 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SPARC	P09486	303 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CR2	P20023	1033 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MAP2K4	P45985	399 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ATP6AP1	Q15904	470 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SGCA	Q16586	387 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MOG	Q16653	247 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZFP69	Q49AA0	526 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CCDC74A	Q96AQ1	378 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	FAM46A	Q96IP4	442 aa	Known RBP	13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	HIST1H2AA	Q96QV6	131 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SECISBP2	Q96T21	854 aa	Known RBP	13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	USP36	Q9P275	1121 aa	Known RBP	13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PCDHGB7	Q9Y5F8	929 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR7A17	O14581	309 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ABO	P16442	354 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SYPL1	Q16563	259 aa		13.49	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PLK5	Q496M5	336 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms