RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 ANXA9O76027 345 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 DUS4LO95620 317 aaKnown RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 FCER2P06734 321 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 CYP11B1P15538 503 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 PRDX2P32119 198 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ACAA2P42765 397 aaKnown RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ZNF131P52739 623 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 NDST1P52848 882 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 NDST2P52849 883 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ERVK-16P61578 105 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 RPS4XP62701 263 aaKnown RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 RBBP4Q09028 425 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 KLHL30Q0D2K2 578 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 TRDNQ13061 729 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 TRADDQ15628 312 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 MLF2Q15773 248 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 CCL15Q16663 113 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 IMMTQ16891 758 aaKnown RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 WLSQ5T9L3 541 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 GALNT17Q6IS24 598 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 RHBDD2Q6NTF9 364 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 CWC27Q6UX04 472 aaKnown RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 MOB2Q70IA6 237 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 GPR142Q7Z601 462 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 BCORP1Q8N888 145 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 CHDHQ8NE62 594 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ZNF397Q8NF99 534 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 NUP37Q8NFH4 326 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 SDR42E1Q8WUS8 393 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 TMEM37Q8WXS4 190 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 NCLNQ969V3 563 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 DUX3Q96PT4 197 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 USP28Q96RU2 1077 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 DGCR6LQ9BY27 220 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 PARLQ9H300 379 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ROPN1Q9HAT0 212 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 UBE2TQ9NPD8 197 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 BARHL2Q9NY43 387 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 WWOXQ9NZC7 414 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ANKMY1Q9P2S6 941 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 THAP10Q9P2Z0 257 aaPredicted RBP5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 ASIC3Q9UHC3 531 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 SH3BGRL2Q9UJC5 107 aa5.05□□□□□ -1.6
SMARCA2-240ENST00000635392 SSC5DA1L4H1 1573 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 MEI4A8MW99 385 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 MPHOSPH10O00566 681 aaKnown RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 CHADO15335 359 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 PRKAB2O43741 272 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 HSPD1P10809 573 aaKnown RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 CHMLP26374 656 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 HOXD10P28358 340 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 TRIM23P36406 574 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 MDH1P40925 334 aaKnown RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 PRMT2P55345 433 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 RPS27AP62979 156 aaKnown RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 NAAAQ02083 359 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 PRKCEQ02156 737 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 SCGB2A2Q13296 93 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ZNF177Q13360 481 aaPredicted RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 KNOP1Q1ED39 458 aaKnown RBP5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 LRIT3Q3SXY7 679 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ZFP69Q49AA0 526 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 BHLHA9Q7RTU4 235 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 CARM1Q86X55 608 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 OR4F5Q8NH21 305 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 OR2T6Q8NHC8 308 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 CHPT1Q8WUD6 406 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ESR2Q92731 530 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ATXN7L3BQ96GX2 97 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 NSMCE3Q96MG7 304 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 SYT15Q9BQS2 421 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 NDUFAF3Q9BU61 184 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 NLNQ9BYT8 704 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 B3GAT2Q9NPZ5 323 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 HOXC10Q9NYD6 342 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 NYAP2Q9P242 653 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ATXN10Q9UBB4 475 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 SLC6A5Q9Y345 797 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 RNF115Q9Y4L5 304 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 ROBO3Q96MS0 1386 aa5.04□□□□□ -1.6
SMARCA2-240ENST00000635392 A0A0D9SFI3 127 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 RALAP11233 206 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 NCF1P14598 390 aaPredicted RBP5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 GP9P14770 177 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 CAPN2P17655 700 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 AOC1P19801 751 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 FCGR2BP31994 310 aaPredicted RBP5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 FCGR2CP31995 323 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 CCNA1P78396 465 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 IRX3P78415 501 aaPredicted RBP5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 CDKL1Q00532 357 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 PMP22Q01453 160 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 ZKSCAN8Q15776 578 aaPredicted RBP5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 ZNF699Q32M78 642 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 ADPRMQ3LIE5 342 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 STEAP1BQ6NZ63 245 aa5.03□□□□□ -1.6
SMARCA2-240ENST00000635392 LCLAT1Q6UWP7 414 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms