RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-222ENST00000625672 PKP2Q99959 881 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 FKRPQ9H9S5 495 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 LOC102725191A0A1B0GVB3 256 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ZNF765Q7L2R6 523 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ULBP3Q9BZM4 244 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 MED16Q9Y2X0 877 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 RGS6P49758 472 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 FCRLBQ6BAA4 426 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 TUBA1CQ9BQE3 449 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 TRBV11-1A0A0K0K1C0 115 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 PTHP01270 115 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ADARB1P78563 741 aaKnown RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 FADDQ13158 208 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 CDONQ4KMG0 1287 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 RNASE10Q5GAN6 216 aaKnown RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 HDAC2Q92769 488 aaKnown RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ARNT2Q9HBZ2 717 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 A0A096LPI6 279 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 AMY2AP04746 511 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 CD63P08962 238 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 MC3RP41968 323 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ALDH3B2P48448 385 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 CDKN3Q16667 212 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 Q8N402 240 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 TMEM151AQ8N4L1 468 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 C1orf74Q96LT6 269 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 SCML1Q9UN30 329 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 CRHBPP24387 322 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 BMPR1AP36894 532 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 MAGEA6P43360 314 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 SNX18Q96RF0 628 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
NRXN1-222ENST00000625672 GIMAP2Q9UG22 337 aa13.17□□□□□ -0.3
NRXN1-222ENST00000625672 NSG1A0A0A6YYJ2 146 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 PTH2RP49190 550 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 EIF4HQ15056 248 aaKnown RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 SHFQ7M4L6 423 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 RHBDD3Q9Y3P4 386 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 FAM171A2A8MVW0 826 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 WDPCPO95876 746 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 SF3A2Q15428 464 aaKnown RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 BBS1Q8NFJ9 593 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 PRAMEF26H0Y7S4 382 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 IFNA17P01571 189 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TMEM71Q6P5X7 295 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 EPGNQ6UW88 154 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TMPRSS7Q7RTY8 843 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 KANSL1Q7Z3B3 1105 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 ZNF382Q96SR6 550 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TMEM265A0A087WTH1 108 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 CD300LBA8K4G0 201 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 PCDH17O14917 1159 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 PPP1R3DO95685 299 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 MTHFD2P13995 350 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 CSNK1A1P48729 337 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 FAPQ12884 760 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 ZFYVE21Q9BQ24 234 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 CHRDQ9H2X0 955 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 INMT-MINDY4F8WBC2 141 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 RHCEP18577 417 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TDGQ13569 410 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 OR11L1Q8NGX0 322 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 AMDHD1Q96NU7 426 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 ZNF223Q9UK11 482 aaPredicted RBP13.16□□□□□ -0.3
NRXN1-222ENST00000625672 SGK494L7N484 410 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 AP1G1O43747 822 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TAS2R20P59543 309 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 PDE7AQ13946 482 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 NELL2Q99435 816 aa13.16□□□□□ -0.3
NRXN1-222ENST00000625672 TIMM8AO60220 97 aaPredicted RBP13.15□□□□□ -0.3
NRXN1-222ENST00000625672 ZNF44P15621 663 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 OR52N2Q8NGI0 321 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 GOSR2O14653 212 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 OPN1LWP04000 364 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 SLC41A3Q96GZ6 507 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 SERINC2Q96SA4 455 aa13.15□□□□□ -0.3
NRXN1-222ENST00000625672 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms