RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ENTPD6O75354 484 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 PTHP01270 115 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 IL9P15248 144 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 GSTM3P21266 225 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 OCA2Q04671 838 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 COL9A2Q14055 689 aaPredicted RBP18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 TRAM2Q15035 370 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 PUS10Q3MIT2 529 aaKnown RBP18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 SHISA5Q8N114 240 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 CLIP4Q8N3C7 705 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 GPA33Q99795 319 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 PRR14Q9BWN1 585 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 PIGUQ9H490 435 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 ANKRD19PQ9H560 264 aa18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF443Q9Y2A4 671 aaPredicted RBP18.42■□□□□ 0.54
PCDHB11-202ENST00000624887 IFI6P09912 130 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 ALDH4A1P30038 563 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 NCS1P62166 190 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 ST3GAL3Q11203 375 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 PLAG1Q6DJT9 500 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 LINC00299Q6ZSB3 139 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 SLCO6A1Q86UG4 719 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 PEX5LQ8IYB4 626 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 DYNC2LI1Q8TCX1 351 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 RPL3LQ92901 407 aaKnown RBP18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 SDF2Q99470 211 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 STARD5Q9NSY2 213 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 SEMA4GQ9NTN9 838 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 CPSF4LA6NMK7 179 aaKnown RBP18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 CNOT3O75175 753 aaKnown RBP18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 CCNYL3P0C7X3 344 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 IFNA8P32881 189 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 TRHRP34981 398 aaPredicted RBP18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 IFNGR2P38484 337 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 AVPR1BP47901 424 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 KLHL35Q6PF15 583 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 SLC46A3Q7Z3Q1 461 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 ARHGEF39Q8N4T4 335 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 CACYBPQ9HB71 228 aaKnown RBP18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 ADAP2Q9NPF8 381 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF232Q9UNY5 417 aa18.41■□□□□ 0.54
PCDHB11-202ENST00000624887 EFCAB9A8MZ26 197 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 SGK494L7N484 410 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 CSF2P04141 144 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 NT5EP21589 574 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 GIPRP48546 466 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 C21orf59P57076 290 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 RAB38P57729 211 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 RGS8P57771 180 aaPredicted RBP18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 DUSP8Q13202 625 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 OCLNQ16625 522 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 DGUOKQ16854 277 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 PRICKLE4Q2TBC4 344 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 ZCCHC12Q6PEW1 402 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF367Q7RTV3 350 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 C19orf47Q8N9M1 422 aaKnown RBP18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 GNPDA2Q8TDQ7 276 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 VMP1Q96GC9 406 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 POLDIP3Q9BY77 421 aaKnown RBP18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 ZNF350Q9GZX5 532 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 DUSP22Q9NRW4 184 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 TBC1D23Q9NUY8 699 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 CA14Q9ULX7 337 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 KNL1Q8NG31 2342 aa18.4■□□□□ 0.54
PCDHB11-202ENST00000624887 KRBA1A5PL33 1030 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 AP3D1O14617 1153 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 ADRA2AP08913 450 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 CDH3P22223 829 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 MAZP56270 477 aaKnown RBP18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 CDK5Q00535 292 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 LARS2Q15031 903 aaKnown RBP18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 MEDAGQ5VYS4 303 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 SLC15A4Q8N697 577 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 TCEANCQ8N8B7 351 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 CDRT4Q8N9R6 151 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 CHRDQ9H2X0 955 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 ANKHQ9HCJ1 492 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 MAT2BQ9NZL9 334 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 DNAJC27Q9NZQ0 273 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 SATB2Q9UPW6 733 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 AGAP5A6NIR3 686 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 AIREO43918 545 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 UBXN7O94888 489 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 WNT1P04628 370 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 THBS1P07996 1170 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 ALOX5P09917 674 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 CD27P26842 260 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 FASLGP48023 281 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 PCYT1AP49585 367 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 MGAT2Q10469 447 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 GINS1Q14691 196 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 ELOCQ15369 112 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 DEFB110Q30KQ9 67 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 SLC25A30Q5SVS4 291 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 MFSD4BQ5TF39 518 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 ZNF836Q6ZNA1 936 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 PRICKLE2Q7Z3G6 844 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 FAM26EQ8N5C1 309 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 IQCF1Q8N6M8 205 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms