RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SLC36A3Q495N2 470 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 C14orf28Q4W4Y0 310 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 CYBRD1Q53TN4 286 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF506Q5JVG8 444 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 NCR3LG1Q68D85 454 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF343Q6P1L6 599 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 BTNL3Q6UXE8 466 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 DENND6BQ8NEG7 585 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 OR2T34Q8NGX1 318 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 OR4Q3Q8NH05 313 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 FNDC8Q8TC99 324 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 UPRTQ96BW1 309 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 C11orf24Q96F05 449 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-213ENST00000622183 RBM18Q96H35 190 aaKnown RBP3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ELMO2Q96JJ3 720 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 C4orf36Q96KX1 117 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 CASD1Q96PB1 797 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 TXN2Q99757 166 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 VGLL1Q99990 258 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 RAB33BQ9H082 229 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ADNPQ9H2P0 1102 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 GPN2Q9H9Y4 310 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-213ENST00000622183 PALMDQ9NP74 551 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 EIF3LQ9Y262 564 aaKnown RBP3.93□□□□□ -1.78
CPNE3-213ENST00000622183 IGHV3OR16-12A0A075B7B8 117 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 TRBV7-9A0A0J9YWB2 115 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 A0A1B0GTH9 108 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 KRTAP16-1A8MUX0 517 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 E9PQ18 207 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 C11orf98E9PRG8 122 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 CLDN5O00501 218 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 ANP32DO95626 131 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 MBD3O95983 291 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 CSF2P04141 144 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 WNT2P09544 360 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 DLSTP36957 453 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 POU3F4P49335 361 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 ARHGDIAP52565 204 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 OSTNP61366 133 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 MS4A2Q01362 244 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 SNTB2Q13425 540 aaKnown RBP3.92□□□□□ -1.78
CPNE3-213ENST00000622183 ZIC1Q15915 447 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 USH1GQ495M9 461 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 NADK2Q4G0N4 442 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 SEL1L3Q68CR1 1132 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF841Q6ZN19 808 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 GPRIN3Q6ZVF9 776 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 BHLHA9Q7RTU4 235 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 CEACAM19Q7Z692 300 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 ZDHHC21Q8IVQ6 265 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 CRYGNQ8WXF5 182 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 DNAJA3Q96EY1 480 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 PSMB7Q99436 277 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 ERP44Q9BS26 406 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 GFRA4Q9GZZ7 299 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 VPS33BQ9H267 617 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 RAI14Q9P0K7 980 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 RCOR3Q9P2K3 495 aaPredicted RBP3.92□□□□□ -1.78
CPNE3-213ENST00000622183 GALPQ9UBC7 116 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 KLK13Q9UKR3 277 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 RNF24Q9Y225 148 aa3.92□□□□□ -1.78
CPNE3-213ENST00000622183 CARMIL1Q5VZK9 1371 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 JAK2O60674 1132 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 TBX19O60806 448 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 RENP00797 406 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 MELTFP08582 738 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 HNRNPA2B1P22626 353 aaKnown RBP3.91□□□□□ -1.78
CPNE3-213ENST00000622183 IGFBP5P24593 272 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 PSMA5P28066 241 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 IFNAR2P48551 515 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 EMDP50402 254 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 CYLC2Q14093 348 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-213ENST00000622183 RAB35Q15286 201 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 UBE2V2Q15819 145 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 MS4A13Q5J8X5 152 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 CES3Q6UWW8 571 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 GSG1LQ6UXU4 331 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 PRSS48Q7RTY5 328 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 PPP1R42Q7Z4L9 355 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 SLC47A2Q86VL8 602 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 C17orf47Q8NEP4 570 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 RPP25Q9BUL9 199 aaKnown RBP3.91□□□□□ -1.78
CPNE3-213ENST00000622183 GSDMCQ9BYG8 508 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 COMMD4Q9H0A8 199 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 SLC25A51Q9H1U9 297 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 RMND5AQ9H871 391 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 GNB4Q9HAV0 340 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 RBM28Q9NW13 759 aaKnown RBP3.91□□□□□ -1.78
CPNE3-213ENST00000622183 GRIN2DO15399 1336 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 KIF26BQ2KJY2 2108 aa3.91□□□□□ -1.78
CPNE3-213ENST00000622183 IGKV3D-15A0A087WSY6 115 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 SHISA9B4DS77 424 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 CTAGE5O15320 804 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 PI15O43692 258 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 RAMP1O60894 148 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 UFL1O94874 794 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 IGHV3-13P01766 116 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 HOXD4P09016 255 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 CLUP10909 449 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms