RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 HSPA12AO43301 675 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 AIFM1O95831 613 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 DHFRP00374 187 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 C8BP07358 591 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 IL9P15248 144 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 UBE2NP61088 152 aaKnown RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 HBA1P69905 142 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 GPR19Q15760 415 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 TSTQ16762 297 aaKnown RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 METRNLQ641Q3 311 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 ASTLQ6HA08 431 aaPredicted RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 HMBOX1Q6NT76 420 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 SYCE2Q6PIF2 218 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 SPNS2Q8IVW8 549 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 ZNF611Q8N823 705 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 TNFAIP8L1Q8WVP5 186 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 CDS1Q92903 461 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 KCTD7Q96MP8 289 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 BIRC8Q96P09 236 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 MROQ9BYG7 248 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 DIABLOQ9NR28 239 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 USP36Q9P275 1121 aaKnown RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 YY2O15391 372 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 CLPXO76031 633 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 PLATP00750 562 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 CPMP14384 443 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 GDF1P27539 372 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 GMFBP60983 142 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 MRPL49Q13405 166 aaKnown RBP8.71□□□□□ -1.02
GGA3-223ENST00000621870 COL13A1Q5TAT6 717 aaPredicted RBP8.71□□□□□ -1.02
GGA3-223ENST00000621870 LINGO2Q7L985 606 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 DTWD1Q8N5C7 304 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 CCDC54Q8NEL0 328 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 OR52E2Q8NGJ4 325 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 NETO1Q8TDF5 533 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 PIK3R3Q92569 461 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 FAM46AQ96IP4 442 aaKnown RBP8.71□□□□□ -1.02
GGA3-223ENST00000621870 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
GGA3-223ENST00000621870 DHRS4Q9BTZ2 278 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 KIR3DX1Q9H7L2 352 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 MYNNQ9NPC7 610 aa8.71□□□□□ -1.02
GGA3-223ENST00000621870 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
GGA3-223ENST00000621870 UNC119BA6NIH7 251 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 YKT6O15498 198 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 HLA-DPB1P04440 258 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CKMT1AP12532 417 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PGAM2P15259 253 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 GABRG2P18507 467 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 METAP1P53582 386 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ST3GAL4Q11206 333 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 E2F2Q14209 437 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SYPL1Q16563 259 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PYCR3Q53H96 274 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 OPN5Q6U736 354 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 Q6ZNB5 142 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CYP4V2Q6ZWL3 525 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 IGFN1Q86VF2 1251 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 LRRC17Q8N6Y2 441 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PJA1Q8NG27 643 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SLC7A6OSQ96CW6 309 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 LRR1Q96L50 414 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 OR4K3Q96R72 315 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 LIN28AQ9H9Z2 209 aaKnown RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 TAS2R10Q9NYW0 307 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SCN1AP35498 2009 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 TRPM6Q9BX84 2022 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 I6L893 689 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 SULT2B1O00204 365 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 MBTPS2O43462 519 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 KDM4BO94953 1096 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 MMP2P08253 660 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 GLULP15104 373 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 EIF2B2P49770 351 aaKnown RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 STK11Q15831 433 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SFT2D3Q587I9 215 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 C18orf63Q68DL7 685 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PLEKHG7Q6ZR37 379 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ZNF775Q96BV0 537 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 ZNF707Q96C28 371 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 TMEM41AQ96HV5 264 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PITHD1Q9GZP4 211 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 TTYH1Q9H313 450 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 EPHX3Q9H6B9 360 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 TEX10Q9NXF1 929 aaPredicted RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CNIH4Q9P003 139 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 COL4A5P29400 1685 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 A0A1W2PPK0 400 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 FABP12A6NFH5 140 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PDCD5O14737 125 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SLCO2B1O94956 709 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ARHGEF15O94989 841 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 MT-ND5P03915 603 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CD63P08962 238 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SCN1BQ07699 218 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 DSG2Q14126 1118 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SPATS1Q496A3 300 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 MEX3DQ86XN8 651 aaKnown RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 ZSCAN4Q8NAM6 433 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms