RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 FAM26DQ5JW98 314 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 FCRLBQ6BAA4 426 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 RANBP10Q6VN20 620 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 TUBA1AQ71U36 451 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 RBMX2Q9Y388 322 aaKnown RBP10.77□□□□□ -0.69
CLIP1-219ENST00000620786 PRSS21Q9Y6M0 314 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 CHD4Q14839 1912 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 TBX10O75333 385 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 C1SP09871 688 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 BLOC1S3Q6QNY0 202 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 LRRN1Q6UXK5 716 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 KLHDC9Q8NEP7 349 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 KCNIP3Q9Y2W7 256 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 C5P01031 1676 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 NPIPA5A0A0B4J1W7 369 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 BLACEA4D250 179 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 NPIPA7E9PJI5 369 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 KIAA0355O15063 1070 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 YKT6O15498 198 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 EDN1P05305 212 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 NPIPA8P0DM63 369 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 RAC2P15153 192 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ACPPP15309 386 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 DDCP20711 480 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 RPE65Q16518 533 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ISCA2Q86U28 154 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ACOT4Q8N9L9 421 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 POGLUT1Q8NBL1 392 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 TAMM41Q96BW9 452 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 OR6C1Q96RD1 312 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF226Q9NYT6 803 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 CCL26Q9Y258 94 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 MPPED1O15442 326 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 DIRAS3O95661 229 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PYCR1P32322 319 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 YPEL5P62699 121 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 BDH1Q02338 343 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 RBM39Q14498 530 aaKnown RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 KLBQ86Z14 1044 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 SAMD12Q8N8I0 201 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 NEIL3Q8TAT5 605 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 TCTN2Q96GX1 697 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PRSS16Q9NQE7 514 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 REV1Q9UBZ9 1251 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 BOKQ9UMX3 212 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PCDHGA10Q9Y5H3 936 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 A0A1B0GTW7 788 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 CD8B2A6NJW9 211 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ANKRD28O15084 1053 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ZFAND5O76080 213 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 MT-ND2P03891 347 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 CD8BP10966 210 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PSMB5P28074 263 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 MAGEA8P43361 318 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 HTR6P50406 440 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 TAP2Q03519 686 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ERV3-1Q14264 604 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 CDNFQ49AH0 187 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 DCST2Q5T1A1 773 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 NKAIN2Q5VXU1 208 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 AWAT2Q6E213 333 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 GCDHQ92947 438 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 FAM46BQ96A09 425 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 TMEM68Q96MH6 324 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PTTG2Q9NZH5 202 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 OR6C2Q9NZP2 312 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 A6NIZ1 184 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 UQCRC1P31930 480 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 RAP1BP61224 184 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 RAP1AP62834 184 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 GRK1Q15835 563 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 TMEM69Q5SWH9 247 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 IGFN1Q86VF2 1251 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 OR7G3Q8NG95 312 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 CDS1Q92903 461 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 INPP5KQ9BT40 448 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PITHD1Q9GZP4 211 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 EMC3Q9P0I2 261 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 SIGLEC6O43699 453 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 NOVP48745 357 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF140P52738 457 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 RRADP55042 308 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PRPS1P60891 318 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PSMA6P60900 246 aaKnown RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ARF3P61204 181 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ARF1P84077 181 aaKnown RBP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 CDKL4Q5MAI5 379 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 PLBD1Q6P4A8 553 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 C3P1Q6ZMU1 363 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 LANCL3Q6ZV70 420 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 AKAP1Q92667 903 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLIP1-219ENST00000620786 MAGIXQ9H6Y5 334 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF160Q9HCG1 818 aa10.76□□□□□ -0.69
CLIP1-219ENST00000620786 FAM189A1O60320 539 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 OPN1LWP04000 364 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SFTPBP07988 381 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 TMEM225BP0DP42 221 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms