RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 C19orf53Q9UNZ5 99 aaPredicted RBP15.62■□□□□ 0.09
HMGN3-203ENST00000620514 WBP11Q9Y2W2 641 aaKnown RBP15.62■□□□□ 0.09
HMGN3-203ENST00000620514 OR10H1Q9Y4A9 318 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 WIF1Q9Y5W5 379 aa15.62■□□□□ 0.09
HMGN3-203ENST00000620514 PLOD2O00469 737 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 RGS14O43566 566 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 AKAP10O43572 662 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 PSMG1O95456 288 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 CYP4B1P13584 511 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 BMP5P22003 454 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 PNLIPRP2P54317 469 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 GAS1P54826 345 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 ZNF385BQ569K4 471 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 NSUN5P2Q63ZY6 315 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 POMZP3Q6PJE2 187 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 ZNF551Q7Z340 670 aaPredicted RBP15.61■□□□□ 0.09
HMGN3-203ENST00000620514 LACC1Q8IV20 430 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 CLYBLQ8N0X4 340 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 OR2L13Q8N349 312 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 RIBC1Q8N443 379 aaPredicted RBP15.61■□□□□ 0.09
HMGN3-203ENST00000620514 AENQ8WTP8 325 aaKnown RBP15.61■□□□□ 0.09
HMGN3-203ENST00000620514 METTL2AQ96IZ6 378 aaKnown RBP15.61■□□□□ 0.09
HMGN3-203ENST00000620514 FCRL1Q96LA6 429 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 TSSK3Q96PN8 268 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 TRMOQ9BU70 441 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 DDX18Q9NVP1 670 aaKnown RBP15.61■□□□□ 0.09
HMGN3-203ENST00000620514 FLRT3Q9NZU0 649 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 LGALS13Q9UHV8 139 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 DNAJC15Q9Y5T4 150 aa15.61■□□□□ 0.09
HMGN3-203ENST00000620514 OTOGQ6ZRI0 2925 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 SLITRK5O94991 958 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 ACTL6AO96019 429 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 CREB1P16220 341 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 SDC1P18827 310 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 TCEA1P23193 301 aaKnown RBP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 GRK2P25098 689 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 TIMP3P35625 211 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 STARP49675 285 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 ZNF136P52737 540 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 RPL38P63173 70 aaKnown RBP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 IFFO1Q0D2I5 559 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 HSPB3Q12988 150 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 GAB1Q13480 694 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 UGT3A2Q3SY77 523 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 RFTN2Q52LD8 501 aaPredicted RBP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 ARL13AQ5H913 290 aaPredicted RBP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 ZCCHC23Q6ZST2 131 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 TRIM42Q8IWZ5 723 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 CLHC1Q8NHS4 586 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 TCP10LQ8TDR4 215 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 CIDECQ96AQ7 238 aaPredicted RBP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 ZNF559Q9BR84 538 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 TAS2R10Q9NYW0 307 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 GIMAP2Q9UG22 337 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 BAIAP2L1Q9UHR4 511 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 ITGB1BP2Q9UKP3 347 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 L3MBTL1Q9Y468 752 aa15.6■□□□□ 0.09
HMGN3-203ENST00000620514 V9GYY5 206 aaPredicted RBP15.6■□□□□ 0.09
HMGN3-203ENST00000620514 TACC2O95359 2948 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 CD8B2A6NJW9 211 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 LSM1O15116 133 aaKnown RBP15.59■□□□□ 0.09
HMGN3-203ENST00000620514 PDPK1O15530 556 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 SCO2O43819 266 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 NPHS1O60500 1241 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 IL2RAP01589 272 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 NEFHP12036 1026 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 SRD5A2P31213 254 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 ARRB2P32121 409 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 AGFG1P52594 562 aaKnown RBP15.59■□□□□ 0.09
HMGN3-203ENST00000620514 GFRA1P56159 465 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 PSPHP78330 225 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 SRYQ05066 204 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 MYBPHQ13203 477 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 GALNTL6Q49A17 601 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 PLXDC2Q6UX71 529 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 RNF165Q6ZSG1 346 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 C9orf106Q8NAJ2 232 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 AGR3Q8TD06 166 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 TWIST2Q8WVJ9 160 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 CCT7Q99832 543 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 TUBA1CQ9BQE3 449 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 RTN4RQ9BZR6 473 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 KCNN3Q9UGI6 736 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 CBLCQ9ULV8 474 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 TRAF6Q9Y4K3 522 aa15.59■□□□□ 0.09
HMGN3-203ENST00000620514 MBD3L4A6NDZ8 208 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 MBD3L3A6NE82 208 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 MBD3L5A6NJ08 208 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 DVL2O14641 736 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 PIP5K1BO14986 540 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 FADS1O60427 444 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 CHEK2O96017 543 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 FGF4P08620 206 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 CPN1P15169 458 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 CAPN3P20807 821 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 UQCRC1P31930 480 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 EVI2BP34910 448 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 GCKP35557 465 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 MRPS22P82650 360 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms