RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GORASP2Q9H8Y8 452 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 LRTM1Q9HBL6 345 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PLGRKTQ9HBL7 147 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ZBTB20Q9HC78 741 aaPredicted RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF160Q9HCG1 818 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PRM3Q9NNZ6 103 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PRTFDC1Q9NRG1 225 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 OLAHQ9NV23 265 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 C1orf109Q9NX04 203 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 LYARQ9NX58 379 aaKnown RBP4.88□□□□□ -1.63
SHMT1-211ENST00000618902 UBAP1Q9NZ09 502 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC167Q9P0B6 97 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PHF11Q9UIL8 331 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 MAGEL2Q9UJ55 1249 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 BLOC1S6Q9UL45 172 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 PCDHA9Q9Y5H5 950 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 SNX13Q9Y5W8 968 aa4.88□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC160A6NGH7 325 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TRIM64BA6NI03 449 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC154A6NI56 674 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SAC3D1A6NKF1 404 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TMEM200CA6NKL6 621 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 FBP2O00757 339 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ANKRD28O15084 1053 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 AKAP10O43572 662 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF354AO60765 605 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 NOL3O60936 208 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SEC22BO75396 215 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 NME6O75414 186 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC22A3O75751 556 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLITRK5O94991 958 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 GPR75O95800 540 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 LDLRP01130 860 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 IL6P05231 212 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ANXA4P09525 319 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SMIM18P0DKX4 95 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 BCKDHAP12694 445 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 EDN3P14138 238 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 COX7A2P14406 83 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF12P17014 697 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 JUNBP17275 347 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 DDX5P17844 614 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 S1PR1P21453 382 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TRHRP34981 398 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 BUD31P41223 144 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TNFSF10P50591 281 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TMBIM6P55061 237 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 DIO3P55073 304 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 OR4D2P58180 307 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC26A5P58743 744 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 MYBPC1Q00872 1141 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 LRRC74AQ0VAA2 488 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC13A2Q13183 592 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 RCAN2Q14206 197 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF169Q14929 603 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ELAVL1Q15717 326 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 IMPG1Q17R60 797 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF829Q3KNS6 432 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 NADK2Q4G0N4 442 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ATP6AP1LQ52LC2 224 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 FAM98BQ52LJ0 330 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 KRTCAP3Q53RY4 240 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SPIN4Q56A73 249 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 COLEC12Q5KU26 742 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TBCELQ5QJ74 424 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 RBM48Q5RL73 367 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ABHD17BQ5VST6 288 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TMEM198Q66K66 360 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC6A19Q695T7 634 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 FCRLBQ6BAA4 426 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ANKRD26P1Q6NSI1 321 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC48A1Q6P1K1 146 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TTC33Q6PID6 262 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 C16orf47Q6ZP98 133 aaPredicted RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 MSANTD1Q6ZTZ1 278 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SATL1Q86VE3 508 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 RIMKLAQ8IXN7 391 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC15A3Q8IY34 581 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SVOPLQ8N434 492 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 GALNT4Q8N4A0 578 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 FAM26EQ8N5C1 309 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SLC15A4Q8N697 577 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 KRTCAP2Q8N6L1 136 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 BCORP1Q8N888 145 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TMEM178AQ8NBL3 297 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 FAM98AQ8NCA5 519 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 APCDD1LQ8NCL9 501 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 MORN4Q8NDC4 146 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ST6GALNAC3Q8NDV1 305 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 HIPK4Q8NE63 616 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 OR8J3Q8NGG0 315 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 OR5L2Q8NGL0 311 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 OR14A16Q8NHC5 309 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 ELP5Q8TE02 316 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 VPS33AQ96AX1 596 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 SDCCAG3Q96C92 435 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 TUBGCP3Q96CW5 907 aa4.87□□□□□ -1.63
SHMT1-211ENST00000618902 THOC3Q96J01 351 aaKnown RBP4.87□□□□□ -1.63
SHMT1-211ENST00000618902 MPP4Q96JB8 637 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms