RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PRPS1P60891 318 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 LMAN2Q12907 356 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SLC35F1Q5T1Q4 408 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ZNF776Q68DI1 518 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 ZNF534Q76KX8 674 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 NSMAFQ92636 917 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 GGHQ92820 318 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 OTUB2Q96DC9 234 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 MRPL38Q96DV4 380 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 SGTBQ96EQ0 304 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SCRN2Q96FV2 425 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FAM83CQ9BQN1 747 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 BEX2Q9BXY8 128 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 BEX1Q9HBH7 125 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 INTS6Q9UL03 887 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 NPIPA1Q9UND3 350 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 PREX1Q8TCU6 1659 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 A0A1W2PQ45 241 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 A0A1W2PQY0 241 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 TMEM150CB9EJG8 249 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 IMPA2O14732 288 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 CH25HO95992 272 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 PBX2P40425 430 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SCGB2B2Q4G0G5 96 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 EOGTQ5NDL2 527 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 CNIH2Q6PI25 160 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 PRSS55Q6UWB4 352 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 DLEU7Q6UYE1 221 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ZNF808Q8N4W9 903 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 OR5M8Q8NGP6 311 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ZNF461Q8TAF7 563 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 GTF2H4Q92759 462 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 S100PBPQ96BU1 408 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FOXRED1Q96CU9 486 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 CPNE2Q96FN4 548 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 CRB3Q9BUF7 120 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 EVA1AQ9H8M9 152 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 YARS2Q9Y2Z4 477 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 BEST1O76090 585 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 CYB5AP00167 134 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 IL12BP29460 328 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SEMG2Q02383 582 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 KCTD9Q7L273 389 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 MAL2Q969L2 176 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ECHDC3Q96DC8 303 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 TBX5Q99593 518 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ACSS1Q9NUB1 689 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 PCTPQ9UKL6 214 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 TEX13DA0A0J9YY54 714 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 IQCMA0A1B0GVH7 501 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 BLOC1S5-TXNDC5H3BN57 136 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ALDOCP09972 364 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 ZNF865P0CJ78 1059 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 CYCSP99999 105 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 USF2Q15853 346 aaPredicted RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 CDNFQ49AH0 187 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 PDSS1Q5T2R2 415 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FAM69AQ5T7M9 428 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ZNF691Q5VV52 312 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 NPAS3Q8IXF0 933 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FAM26EQ8N5C1 309 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 PNLDC1Q8NA58 520 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 OR5W2Q8NH69 310 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 RPL3LQ92901 407 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 NT5C3BQ969T7 300 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SEPSECSQ9HD40 501 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 LIN7CQ9NUP9 197 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 SARDHQ9UL12 918 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FARSAQ9Y285 508 aaKnown RBP2.9□□□□□ -1.94
LPP-221ENST00000618621 INSL6Q9Y581 213 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 MYOM1P52179 1685 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ADH7P40394 386 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 CASP3P42574 277 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 TAS2R38P59533 333 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ACTA2P62736 377 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 RHOBP62745 196 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 ACTG2P63267 376 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 VEZF1Q14119 521 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 C1orf122Q6ZSJ8 110 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 Q6ZVL8 140 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SLC29A4Q7RTT9 530 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FAM129CQ86XR2 697 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 FUNDC1Q8IVP5 155 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SLC28A3Q9HAS3 691 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 Q9N2J8 555 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 RXFP3Q9NSD7 469 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 HCN3Q9P1Z3 774 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SNED1Q8TER0 1413 aa2.9□□□□□ -1.94
LPP-221ENST00000618621 SMCHD1A6NHR9 2005 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 FAM155AB1AL88 458 aaPredicted RBP2.9□□□□□ -1.95
LPP-221ENST00000618621 PRAF2O60831 178 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 SOX14O95416 240 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 SLC10A3P09131 477 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 BLKP51451 505 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 POU6F2P78424 691 aaPredicted RBP2.9□□□□□ -1.95
LPP-221ENST00000618621 SELENBP1Q13228 472 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 ITPRIPL2Q3MIP1 535 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 PKDCCQ504Y2 493 aa2.9□□□□□ -1.95
LPP-221ENST00000618621 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.9□□□□□ -1.95
LPP-221ENST00000618621 TMED4Q7Z7H5 227 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms