RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 GIN1Q9NXP7 522 aa23.73■■□□□ 1.39
VEGFC-202ENST00000618562 SLC6A14Q9UN76 642 aa23.73■■□□□ 1.39
VEGFC-202ENST00000618562 SLC22A7Q9Y694 548 aa23.73■■□□□ 1.39
VEGFC-202ENST00000618562 CCDC163A0A0D9SF12 145 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 SNRPGP62308 76 aaKnown RBP23.72■■□□□ 1.39
VEGFC-202ENST00000618562 ARMCX4Q5H9R4 360 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 KRT73Q86Y46 540 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 OR51I1Q9H343 314 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 ZNF780BQ9Y6R6 833 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 METTL15A6NJ78 407 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 FAM227AF5H4B4 570 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 MPIP34949 423 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 SLC15A1P46059 708 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 RGS6P49758 472 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 UGT2B15P54855 530 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 SEC23BQ15437 767 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 TMEM107Q6UX40 140 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 NLGN4XQ8N0W4 816 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 AMER2Q8N7J2 671 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 SFXN5Q8TD22 340 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 LYRM4Q9HD34 91 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 PCDHGA3Q9Y5H0 932 aa23.72■■□□□ 1.39
VEGFC-202ENST00000618562 GALR3O60755 368 aaPredicted RBP23.71■■□□□ 1.39
VEGFC-202ENST00000618562 OR12D1P0DN82 309 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 KHKP50053 298 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 ANXA11P50995 505 aaKnown RBP23.71■■□□□ 1.39
VEGFC-202ENST00000618562 LIMK1P53667 647 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 SIM1P81133 766 aaPredicted RBP23.71■■□□□ 1.39
VEGFC-202ENST00000618562 SLX4IPQ5VYV7 408 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 DEF8Q6ZN54 512 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 MCATQ8IVS2 390 aaKnown RBP23.71■■□□□ 1.39
VEGFC-202ENST00000618562 ARHGEF39Q8N4T4 335 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 OR9A2Q8NGT5 310 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 FUZQ9BT04 418 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 CCDC59Q9P031 241 aaKnown RBP23.71■■□□□ 1.39
VEGFC-202ENST00000618562 OR10H3O60404 316 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 SLITRK5O94991 958 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 TDGF1P13385 188 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 POU1F1P28069 291 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 CD40LGP29965 261 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 CD97P48960 835 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 GFERP55789 205 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 SRSF5Q13243 272 aaKnown RBP23.71■■□□□ 1.39
VEGFC-202ENST00000618562 SYPL1Q16563 259 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 TMEM201Q5SNT2 666 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 PLAG1Q6DJT9 500 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 SLC25A45Q8N413 288 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 OR5T3Q8NGG3 340 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 Q96MT0 163 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 ERVMER34-1Q9H9K5 563 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 IFT52Q9Y366 437 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 RNF215Q9Y6U7 377 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 CACNA1EQ15878 2313 aa23.71■■□□□ 1.39
VEGFC-202ENST00000618562 PRAMEF27A3QJZ7 478 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 NR2F1P10589 423 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 PPP5CP53041 499 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 IFITM3Q01628 133 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 TUBA3EQ6PEY2 450 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 OR4D11Q8NGI4 311 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 OR5D16Q8NGK9 328 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 VANGL1Q8TAA9 524 aaPredicted RBP23.7■■□□□ 1.38
VEGFC-202ENST00000618562 BBS10Q8TAM1 723 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 SPATA5L1Q9BVQ7 753 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 NXF2Q9GZY0 626 aaKnown RBP23.7■■□□□ 1.38
VEGFC-202ENST00000618562 SLC25A19Q9HC21 320 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 BCL2L10Q9HD36 194 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 PRMT8Q9NR22 394 aaPredicted RBP23.7■■□□□ 1.38
VEGFC-202ENST00000618562 CABIN1Q9Y6J0 2220 aa23.7■■□□□ 1.38
VEGFC-202ENST00000618562 TNRC6BQ9UPQ9 1833 aaKnown RBP23.7■■□□□ 1.38
VEGFC-202ENST00000618562 ALOX5P09917 674 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 TLX1P31314 330 aaPredicted RBP23.69■■□□□ 1.38
VEGFC-202ENST00000618562 CRISP3P54108 245 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 PRKAG1P54619 331 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 BNC1Q01954 994 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 LTB4RQ15722 352 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 PERM1Q5SV97 790 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 LYSMD4Q5XG99 296 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 C12orf73Q69YU5 71 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 PGBD2Q6P3X8 592 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 BHLHB9Q6PI77 547 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 XAGE5Q8WWM1 108 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 TCTN2Q96GX1 697 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 RHPN2P1A8MT19 583 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 UGT2B17O75795 530 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 GRK5P34947 590 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 MC3RP41968 323 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 DHPSP49366 369 aaPredicted RBP23.69■■□□□ 1.38
VEGFC-202ENST00000618562 GNA13Q14344 377 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 TIMM50Q3ZCQ8 353 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 C6orf132Q5T0Z8 1188 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 C19orf48Q6RUI8 117 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 RBM45Q8IUH3 476 aaKnown RBP23.69■■□□□ 1.38
VEGFC-202ENST00000618562 OR4N5Q8IXE1 308 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 ELP4Q96EB1 424 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 TGM7Q96PF1 710 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 C11orf16Q9NQ32 467 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 PRDM9Q9NQV7 894 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 LRIT1Q9P2V4 623 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 TRPC4Q9UBN4 977 aa23.69■■□□□ 1.38
VEGFC-202ENST00000618562 A0A1W2PRQ8 180 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms