RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DHRS7BQ6IAN0 325 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 DPPA2Q7Z7J5 298 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SERPINA12Q8IW75 414 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF671Q8TAW3 534 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PEX11GQ96HA9 241 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MBOAT4Q96T53 435 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RBM24Q9BX46 236 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 C1QTNF3Q9BXJ4 246 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PLEKHA3Q9HB20 300 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 C1RLQ9NZP8 487 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TRABD2BA6NFA1 517 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 IGLON5A6NGN9 336 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 OR10H3O60404 316 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 S1PR1P21453 382 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 STARD6P59095 220 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LHX8Q68G74 356 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GPRIN3Q6ZVF9 776 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MRPL10Q7Z7H8 261 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 OR2L3Q8NG85 312 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 C15orf40Q8WUR7 153 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 AURKBQ96GD4 344 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 SEC16BQ96JE7 1060 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 M0QZQ0 153 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SCO1O75880 301 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CLDN7O95471 211 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 DIRAS3O95661 229 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TSPAN19P0C672 248 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 UBL4AP11441 157 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RPS2P15880 293 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 XCR1P46094 333 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MVKQ03426 396 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF77Q15935 545 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 BEX5Q5H9J7 111 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TIPARPQ7Z3E1 657 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 NOXA1Q86UR1 476 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 DCUN1D4Q92564 292 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 HAO1Q9UJM8 370 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TUBD1Q9UJT1 453 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMEM14AQ9Y6G1 99 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF670-ZNF695F2Z2N8 137 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SUSD5O60279 629 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 DOC2AQ14183 400 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PPA1Q15181 289 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SYT6Q5T7P8 510 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 C1orf185Q5T7R7 199 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 HAPLN4Q86UW8 402 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PCNPQ8WW12 178 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 IL17RBQ9NRM6 502 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF490Q9ULM2 529 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 BBIP1A8MTZ0 92 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PROSCO94903 275 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PGRP06401 933 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ADRB1P08588 477 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ACRV1P26436 265 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 FMR1Q06787 632 aaKnown RBP eCLIP3.16□□□□□ -1.9
LPP-220ENST00000617246 TIMM50Q3ZCQ8 353 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 FAM27D1Q5T7N8 215 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RNF170Q96K19 258 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZCCHC3Q9NUD5 404 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 POLDIP2Q9Y2S7 368 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLCO2B1O94956 709 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ADRA1BP35368 520 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SELENBP1Q13228 472 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GTF2H2Q13888 395 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PDCD1Q15116 288 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SGCAQ16586 387 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CLLU1OSQ5K130 101 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CPZQ66K79 652 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GTF2H2CQ6P1K8 395 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ABRAXAS1Q6UWZ7 409 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 OR52E4Q8NGH9 312 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MAPKAP1Q9BPZ7 522 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 COL25A1Q9BXS0 654 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 TUBA4BQ9H853 241 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ERVMER34-1Q9H9K5 563 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMEM59LQ9UK28 342 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 FAM25AB3EWG3 89 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 FAM25CB3EWG5 89 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 FAM25GB3EWG6 89 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 NDUFB3O43676 98 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TCF21O43680 179 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 COX4I1P13073 169 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 F2RL1P55085 397 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TLE3Q04726 772 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CHIT1Q13231 466 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PMS2P3Q13401 168 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RTP5Q14D33 572 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TGFBIQ15582 683 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 METTL11BQ5VVY1 283 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LILRA6Q6PI73 481 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 UTS2BQ765I0 119 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RPF2Q9H7B2 306 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 POLR3HQ9Y535 204 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 HYAL2Q12891 473 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LIPKQ5VXJ0 399 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PLXDC2Q6UX71 529 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMEM184AQ6ZMB5 413 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 OR56A3Q8NH54 315 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms