RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 BTBD2Q9BX70 525 aa14.4□□□□□ -0.1
PCDHGC3-204ENST00000617222 HPF1Q9NWY4 346 aa14.4□□□□□ -0.1
PCDHGC3-204ENST00000617222 ZNF451Q9Y4E5 1061 aa14.4□□□□□ -0.1
PCDHGC3-204ENST00000617222 PCDHGB3Q9Y5G1 929 aa14.4□□□□□ -0.1
PCDHGC3-204ENST00000617222 GMEB1Q9Y692 573 aa14.4□□□□□ -0.1
PCDHGC3-204ENST00000617222 ASNA1O43681 348 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 PPM1BO75688 479 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 KCNK2O95069 426 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 AGR2O95994 175 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 FBXO45P0C2W1 286 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 NAGAP17050 411 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 GPX2P18283 190 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 CALB2P22676 271 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 KRT20P35900 424 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 PIGAP37287 484 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 CASRP41180 1078 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 MAGEA8P43361 318 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 MNAT1P51948 309 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 FBXW4P57775 412 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 DSTNP60981 165 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 PSPHP78330 225 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 TXNL4AP83876 142 aaKnown RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZNF791Q3KP31 576 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 RABL3Q5HYI8 236 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 CCNJQ5T5M9 372 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 ATAD3BQ5T9A4 648 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 DESI1Q6ICB0 168 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 SPINK14Q6IE38 97 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 C9orf43Q8TAL5 461 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 FAM110BQ8TC76 370 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 EFHD2Q96C19 240 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 SPACA9Q96E40 222 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 ADOQ96SZ5 270 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 SH3GL1Q99961 368 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 HOPXQ9BPY8 73 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 RNF32Q9H0A6 362 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 ADNPQ9H2P0 1102 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZNF71Q9NQZ8 489 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 EXD2Q9NVH0 621 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 FBXO34Q9NWN3 711 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 LRFN1Q9P244 771 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 MRTO4Q9UKD2 239 aaKnown RBP14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 CORO2BQ9UQ03 480 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 TP53TG5Q9Y2B4 290 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 PCDHGB7Q9Y5F8 929 aa14.39□□□□□ -0.11
PCDHGC3-204ENST00000617222 PRAMEF27A3QJZ7 478 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 OR5H15A6NDH6 313 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 B2RBV5 119 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 TSPAN2O60636 221 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 IL33O95760 270 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 IGKV1D-16P01601 117 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 NUDT7P0C024 238 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 SLC6A2P23975 617 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 IL12BP29460 328 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 PSME3P61289 254 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 MXRA7P84157 204 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 FADDQ13158 208 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 OR1C1Q15619 314 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 DCST2Q5T1A1 773 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 C6orf89Q6UWU4 347 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 IGFL3Q6UXB1 125 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 ASB18Q6ZVZ8 466 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 C16orf62Q7Z3J2 963 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 GALNT10Q86SR1 603 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 GPALPP1Q8IXQ4 340 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 CYP4Z2PQ8N1L4 340 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 C10orf111Q8N326 155 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZADH2Q8N4Q0 377 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 FAM13CQ8NE31 585 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 OR8J3Q8NGG0 315 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 FBXO27Q8NI29 283 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 TM9SF4Q92544 642 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 DIO2Q92813 273 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 GPATCH1Q9BRR8 931 aaKnown RBP14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 TRIM45Q9H8W5 580 aaPredicted RBP14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 RYDENQ9NUL5 291 aaKnown RBP14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 TUBD1Q9UJT1 453 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 PKD1L2Q7Z442 2459 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 CACNA1GO43497 2377 aa14.38□□□□□ -0.11
PCDHGC3-204ENST00000617222 CDK2AP1O14519 115 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 UGT2B11O75310 529 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 TNFRSF21O75509 655 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 TMED10P49755 219 aaKnown RBP14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 PSMD4P55036 377 aaKnown RBP14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 SLC25A3Q00325 362 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 SYPL1Q16563 259 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 NTRK2Q16620 822 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 ARHGAP11BQ3KRB8 267 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 GPAT3Q53EU6 434 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 GCNT6Q5T4J0 391 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 HEPHL1Q6MZM0 1159 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 C8orf82Q6P1X6 216 aaPredicted RBP14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 OLIG3Q7RTU3 272 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 NUP54Q7Z3B4 507 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZAR1Q86SH2 424 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZNF227Q86WZ6 799 aa14.37□□□□□ -0.11
PCDHGC3-204ENST00000617222 SLC15A3Q8IY34 581 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms