RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 FAM46AQ96IP4 442 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 NT5DC2Q9H857 520 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 CAPN10Q9HC96 672 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 TOR4AQ9NXH8 423 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 RPL36Q9Y3U8 105 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 KLK4Q9Y5K2 254 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 LAMA1P25391 3075 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 ARRDC5A6NEK1 342 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF860A6NHJ4 632 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 CACNB4O00305 520 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 DNAJB6O75190 326 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 TP53P04637 393 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 AZGP1P25311 298 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 IFNA8P32881 189 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC15A1P46059 708 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 GIPRP48546 466 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SMIM11AP58511 58 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF776Q68DI1 518 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SPATC1Q76KD6 591 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 OR8H2Q8N162 312 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZFP41Q8N8Y5 198 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 PBX4Q9BYU1 374 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 LGI1O95970 557 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF888P0CJ79 500 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF16P17020 682 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 CMPK1P30085 196 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 MPIP34949 423 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 PCYT1AP49585 367 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ARHGDIBP52566 201 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SNRPGP62308 76 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ATAT1Q5SQI0 421 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 C12orf73Q69YU5 71 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 LINC00299Q6ZSB3 139 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 TTLQ8NG68 377 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 MTIF3Q9H2K0 278 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 LAMP5Q9UJQ1 280 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 YARS2Q9Y2Z4 477 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 A0A087WUU8 490 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 A8MU76 341 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 LOC110117498-PIK3R3F6TDL0 507 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 K7EQS6 105 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ALOX5P09917 674 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 PSMA1P25786 263 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ETV5P41161 510 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ETV1P50549 477 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 TPTEP56180 551 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 TGM3Q08188 693 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZIC1Q15915 447 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SYT14P1Q58G82 188 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF730Q6ZMV8 503 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 KIF18BQ86Y91 864 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 GATAD2BQ8WXI9 593 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 SPATA5L1Q9BVQ7 753 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 GIMAP4Q9NUV9 329 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 TAS2R7Q9NYW3 318 aa13.03□□□□□ -0.32
CACNA1C-231ENST00000616390 FAM170BA6NMN3 283 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 H3BUI4 141 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 SSX4O60224 188 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 SCG5P05408 212 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 FHP07954 510 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 TRHRP34981 398 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 ERVK-21P61565 698 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 PRR5P85299 388 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 TIMM50Q3ZCQ8 353 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 CCNJQ5T5M9 372 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 SLC48A1Q6P1K1 146 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 FRMD1Q8N878 549 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 SLC16A11Q8NCK7 471 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 OR9Q1Q8NGQ5 310 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 BBS10Q8TAM1 723 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 TIMM29Q9BSF4 260 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 SEMA4GQ9NTN9 838 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 GIN1Q9NXP7 522 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 PCDHGB6Q9Y5F9 930 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 PEX16Q9Y5Y5 336 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 PRSS38A1L453 326 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 A6NCN8 305 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 PROM1O43490 865 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 ICMTO60725 284 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 ALPPP05187 535 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 CCNYL3P0C7X3 344 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 F3P13726 295 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 GPR4P46093 362 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 PDX1P52945 283 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 ADPRHP54922 357 aa13.02□□□□□ -0.33
CACNA1C-231ENST00000616390 TRA2BP62995 288 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms