RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 EIPR1Q53HC9 387 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 CDC20BQ86Y33 519 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 HOMEZQ8IX15 550 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 RAB3IL1Q8TBN0 382 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 C16orf78Q8WTQ4 265 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 KLHL29Q96CT2 875 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 WDYHV1Q96HA8 205 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 NXF5Q9H1B4 397 aaKnown RBP17.28■□□□□ 0.36
CDX1-202ENST00000616154 INTS9Q9NV88 658 aaKnown RBP17.28■□□□□ 0.36
CDX1-202ENST00000616154 EDARQ9UNE0 448 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 CFL2Q9Y281 166 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 DTX4Q9Y2E6 619 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 WBP11Q9Y2W2 641 aaKnown RBP17.28■□□□□ 0.36
CDX1-202ENST00000616154 NIPBLQ6KC79 2804 aaeCLIP17.28■□□□□ 0.36
CDX1-202ENST00000616154 MBD3L4A6NDZ8 208 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 MBD3L3A6NE82 208 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 MBD3L5A6NJ08 208 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 CBX7O95931 251 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 UROSP10746 265 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 DNASE1P24855 282 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 FEN1P39748 380 aaKnown RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 HEPACAMQ14CZ8 416 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 DAZAP2Q15038 168 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 TOMM20Q15388 145 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 CFAP157Q5JU67 520 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 WIPI1Q5MNZ9 446 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 DCST1Q5T197 706 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 NUDCD3Q8IVD9 361 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 GOT1L1Q8NHS2 421 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 MBD3L2Q8NHZ7 208 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 MGARPQ8TDB4 240 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 HGDQ93099 445 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 GATA5Q9BWX5 397 aaPredicted RBP17.27■□□□□ 0.36
CDX1-202ENST00000616154 METTL7AQ9H8H3 244 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 CALHM2Q9HA72 323 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 TAS2R7Q9NYW3 318 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 UTS2RQ9UKP6 389 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 NAV3Q8IVL0 2385 aa17.27■□□□□ 0.36
CDX1-202ENST00000616154 GNB5O14775 395 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 KLF11O14901 512 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 DIAPH2O60879 1101 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ERAL1O75616 437 aaKnown RBP17.26■□□□□ 0.35
CDX1-202ENST00000616154 TACR1P25103 407 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 CTSSP25774 331 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ZNF763Q0D2J5 394 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 KIAA0040Q15053 153 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ZNF628Q5EBL2 1059 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 SLC30A6Q6NXT4 461 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 FAM111BQ6SJ93 734 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ANGPTL8Q6UXH0 198 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 NUP54Q7Z3B4 507 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 FAM83FQ8NEG4 500 aaPredicted RBP17.26■□□□□ 0.35
CDX1-202ENST00000616154 OR1J4Q8NGS1 313 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 CKAP2Q8WWK9 683 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ABTB1Q969K4 478 aaPredicted RBP17.26■□□□□ 0.35
CDX1-202ENST00000616154 POM121Q96HA1 1249 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 TRIB1Q96RU8 372 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ITPAQ9BY32 194 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 BRINP2Q9C0B6 783 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 PLEKHA6Q9Y2H5 1048 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 ZNF780BQ9Y6R6 833 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 VPS13CQ709C8 3753 aa17.26■□□□□ 0.35
CDX1-202ENST00000616154 GNG14A0A1W2PPG7 69 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 SNPHO15079 494 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 ACOX3O15254 700 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 IL18BPO95998 194 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 ACTL6AO96019 429 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 SERPINE1P05121 402 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 ANXA4P09525 319 aaPredicted RBP17.25■□□□□ 0.35
CDX1-202ENST00000616154 KLK2P20151 261 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 DDCP20711 480 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 OPRM1P35372 400 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 SERPINB5P36952 375 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 ALDH9A1P49189 494 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 SORDQ00796 357 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 SNTA1Q13424 505 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 NNATQ16517 81 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 FAM71E1Q6IPT2 247 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 SCIMPQ6UWF3 145 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 KIF18BQ86Y91 864 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 ZPLD1Q8TCW7 415 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 MBD6Q96DN6 1003 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 OMA1Q96E52 524 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 LCORQ96JN0 433 aaPredicted RBP17.25■□□□□ 0.35
CDX1-202ENST00000616154 FCRL1Q96LA6 429 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 ALPK1Q96QP1 1244 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 OSBPL11Q9BXB4 747 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 CCDC134Q9H6E4 229 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 MYNNQ9NPC7 610 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 JKAMPQ9P055 326 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 MED12LQ86YW9 2145 aa17.25■□□□□ 0.35
CDX1-202ENST00000616154 TUBAL3A6NHL2 446 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 TO15178 435 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 NPHS1O60500 1241 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 FGF4P08620 206 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 GRK2P25098 689 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 GCKP35557 465 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 MDH1P40925 334 aaKnown RBP17.24■□□□□ 0.35
CDX1-202ENST00000616154 PTGDSP41222 190 aa17.24■□□□□ 0.35
CDX1-202ENST00000616154 EMDP50402 254 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms