RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SLC28A1O00337 649 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 TM9SF1O15321 606 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PSMG1O95456 288 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 HMGN2P05204 90 aaKnown RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 STSP08842 583 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CYP4B1P13584 511 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CNR1P21554 472 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ADH7P40394 386 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ARFIP1P53367 373 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 MANFP55145 182 aaKnown RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF585AQ6P3V2 769 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 OR2L13Q8N349 312 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CDS1Q92903 461 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 RAB8BQ92930 207 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SH3GL2Q99962 352 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 DDX18Q9NVP1 670 aaKnown RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SIRT5Q9NXA8 310 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 KCNE5Q9UJ90 142 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ENTPD4Q9Y227 616 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 RAP2CQ9Y3L5 183 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PDPK1O15530 556 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 TSPAN2O60636 221 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 FCMRO60667 390 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 TRIM3O75382 744 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ZWINTO95229 277 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 NTN1O95631 604 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 DRD2P14416 443 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SRYQ05066 204 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CD226Q15762 336 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 GXYLT1Q4G148 440 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PAOXQ6QHF9 649 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ARSKQ6UWY0 536 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 RTL4Q6ZR62 310 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 OR5L2Q8NGL0 311 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 OR8K3Q8NH51 312 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SSC4DQ8WTU2 575 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ITLN2Q8WWU7 325 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SLC35A4Q96G79 324 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ATP6V1G3Q96LB4 118 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CCT7Q99832 543 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 UBQLN3Q9H347 655 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ZDHHC11Q9H8X9 412 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SACM1LQ9NTJ5 587 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PHF3Q92576 2039 aaKnown RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 E9PBE3 544 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PLOD3O60568 738 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 KLHL41O60662 606 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PPM1BO75688 479 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CPSF4O95639 269 aaKnown RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 P04436 131 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 KLK2P20151 261 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 GDF1P27539 372 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 MPIP34949 423 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 GPC1P35052 558 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 KIR3DL1P43629 444 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CLDN15P56746 228 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 TRA2BP62995 288 aaKnown RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 PLAURQ03405 335 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 TP53BP2Q13625 1128 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 HLA-DQA1Q5Y7H0 255 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 CBLN3Q6UW01 205 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 ANGPTL8Q6UXH0 198 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 FAM9CQ8IZT9 166 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 NUP43Q8NFH3 380 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 RFWD2Q8NHY2 731 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SPPL2AQ8TCT8 520 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 SH3YL1Q96HL8 342 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 TRMOQ9BU70 441 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 G6PC3Q9BUM1 346 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 GPATCH2Q9NW75 528 aa5.2□□□□□ -1.58
CPNE3-208ENST00000614678 C19orf53Q9UNZ5 99 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-208ENST00000614678 KLRC4-KLRK1H3BQV0 150 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 ADAM11O75078 769 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 ABOP16442 354 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 GAS1P54826 345 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 PMPCAQ10713 525 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 ELOAQ14241 798 aaKnown RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 TOMM34Q15785 309 aaPredicted RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 LSM12Q3MHD2 195 aaKnown RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 FAM174BQ3ZCQ3 159 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 COX20Q5RI15 118 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 OPN5Q6U736 354 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 LGI4Q8N135 537 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF675Q8TD23 568 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 BTBD9Q96Q07 612 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 EML4Q9HC35 981 aaKnown RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 TIMMDC1Q9NPL8 285 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 NMRK1Q9NWW6 199 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 KLRF1Q9NZS2 232 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 SLC5A6Q9Y289 635 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF835Q9Y2P0 537 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 KLF13Q9Y2Y9 288 aaPredicted RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 ANKHD1Q8IWZ3 2542 aaKnown RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 A0A1W2PRB8 838 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 BIRC5O15392 142 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 DDX5P17844 614 aaKnown RBP5.19□□□□□ -1.58
CPNE3-208ENST00000614678 PTGS2P35354 604 aa5.19□□□□□ -1.58
CPNE3-208ENST00000614678 MAP3K8P41279 467 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms