RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 APOBEC3GQ9HC16 384 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 DNMT3AQ9Y6K1 912 aaPredicted RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 OR6C75A6NL08 312 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 GCGRP47871 477 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SOX2P48431 317 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RANP62826 216 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 CYP27C1Q4G0S4 372 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 UNC50Q53HI1 259 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ZDHHC3Q9NYG2 299 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ZNF230Q9UIE0 474 aaPredicted RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 PUS1Q9Y606 427 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHD1-212ENST00000614616 CDK14O94921 469 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 AMD1P17707 334 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 CSNK2A2P19784 350 aaPredicted RBP13.1□□□□□ -0.31
CHD1-212ENST00000614616 IMPA1P29218 277 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 LSMEM1Q8N8F7 131 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 SLAMF9Q96A28 289 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ABRACLQ9P1F3 81 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 FKTNO75072 461 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 GNRH1P01148 92 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 HTR4Q13639 388 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 IRF4Q15306 451 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 SYT6Q5T7P8 510 aaPredicted RBP13.1□□□□□ -0.31
CHD1-212ENST00000614616 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 TRIB2Q92519 343 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ENPP3O14638 875 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 RAD51DO75771 328 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 PPT1P50897 306 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 CLDN8P56748 225 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 MGAT3Q09327 533 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ZBTB8AQ96BR9 441 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ADAM19Q9H013 955 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 KIF26BQ2KJY2 2108 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 NAT2P11245 290 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 TAGLN2P37802 199 aaKnown RBP13.1□□□□□ -0.31
CHD1-212ENST00000614616 RNF4P78317 190 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 LRIF1Q5T3J3 769 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 OR4C5Q8NGB2 326 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 OR4E2Q8NGC2 313 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
CHD1-212ENST00000614616 CENPMQ9NSP4 180 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 SPHK1Q9NYA1 384 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 HTR3BO95264 441 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ADORA3P0DMS8 318 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 CD1DP15813 335 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 INAVAQ3KP66 663 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 OSBPL2Q9H1P3 480 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 EPHA6Q9UF33 1036 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 MRC1P22897 1456 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 KCNK2O95069 426 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 ZNF26P17031 533 aaPredicted RBP13.1□□□□□ -0.31
CHD1-212ENST00000614616 GLYATL2Q8WU03 294 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 TGM7Q96PF1 710 aa13.1□□□□□ -0.31
CHD1-212ENST00000614616 BLOC1S5-TXNDC5H3BN57 136 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 H3BUI4 141 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 LGALS2P05162 132 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 ZNF16P17020 682 aaPredicted RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 ITGB5P18084 799 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 PDSS1Q5T2R2 415 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 U3KQ87 197 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 CTDSP2O14595 271 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 GATCO43716 136 aaKnown RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 CPNE6O95741 557 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 ARL2P36404 184 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 RPS19P39019 145 aaKnown RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 ZNF136P52737 540 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 LRIT3Q3SXY7 679 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 KCTD18Q6PI47 426 aaPredicted RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 SPRED1Q7Z699 444 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 GPR26Q8NDV2 337 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 OR5AK2Q8NH90 309 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 FNDC9Q8TBE3 224 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 SLC2A6Q9UGQ3 507 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 J3QR89 54 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 KHNYNO15037 678 aaKnown RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 HBE1P02100 147 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 FGF4P08620 206 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 C21orf33P30042 268 aaPredicted RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 SELENOWP63302 87 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 ABHD15Q6UXT9 468 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 COX15Q7KZN9 410 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 SFXN5Q8TD22 340 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 PRMT6Q96LA8 375 aaPredicted RBP13.09□□□□□ -0.31
CHD1-212ENST00000614616 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
CHD1-212ENST00000614616 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms