RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 DNAJB13P59910 316 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 MAT1AQ00266 395 aaKnown RBP11.33□□□□□ -0.6
SRRT-215ENST00000614484 SPEM2Q0P670 501 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 TRAF3Q13114 568 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 ZNF404Q494X3 552 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 LARP4Q71RC2 724 aaKnown RBP eCLIP11.33□□□□□ -0.69e-14■■■■■ 49.8
SRRT-215ENST00000614484 EFL1Q7Z2Z2 1120 aaKnown RBP11.33□□□□□ -0.6
SRRT-215ENST00000614484 RPL3LQ92901 407 aaKnown RBP11.33□□□□□ -0.6
SRRT-215ENST00000614484 TMEM125Q96AQ2 219 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 MED8Q96G25 268 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 ZNF300Q96RE9 604 aaPredicted RBP11.33□□□□□ -0.6
SRRT-215ENST00000614484 SLC17A4Q9Y2C5 497 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 PCDHB1Q9Y5F3 818 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 PCDHA9Q9Y5H5 950 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 A0A1W2PR77 199 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 CIB4A0PJX0 185 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 AGAP5A6NIR3 686 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 GOSR1O95249 250 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 CD1DP15813 335 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 LAP3P28838 519 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 TCF15Q12870 199 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 PUM1Q14671 1186 aaKnown RBP eCLIP11.33□□□□□ -0.62e-7■□□□□ 10.9
SRRT-215ENST00000614484 KLHL12Q53G59 568 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 LYPLAL1Q5VWZ2 237 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 UBE2R2Q712K3 238 aaPredicted RBP11.33□□□□□ -0.6
SRRT-215ENST00000614484 ISCA2Q86U28 154 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 YIPF6Q96EC8 236 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 UBXN10Q96LJ8 280 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 NSMCE2Q96MF7 247 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 GPR78Q96P69 363 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 CAPN10Q9HC96 672 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 ERVK-18Q9QC07 812 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
SRRT-215ENST00000614484 A8MXE2 369 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 G3V2T6 193 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 TCAPO15273 167 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 SLC35G4P0C7Q5 338 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 PIGAP37287 484 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 MAZP56270 477 aaKnown RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 EPS8Q12929 822 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 HLA-BQ31612 363 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 GPALPP1Q8IXQ4 340 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 DPYSL5Q9BPU6 564 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 ROGDIQ9GZN7 287 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 DCSTAMPQ9H295 470 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 AKTIPQ9H8T0 292 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 USP22Q9UPT9 525 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 MGAT4DA6NG13 374 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 GDF9O60383 454 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 SH3BGRLO75368 114 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 SLC22A5O76082 557 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 TNFP01375 233 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 TYRP1P17643 537 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 POU1F1P28069 291 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 HERVK_113P63132 956 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 IL5RAQ01344 420 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 ILF3Q12906 894 aaKnown RBP eCLIP11.32□□□□□ -0.6
SRRT-215ENST00000614484 SEC23BQ15437 767 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 AP5B1Q2VPB7 878 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 ANKS6Q68DC2 871 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 WDR73Q6P4I2 378 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 TFGQ92734 400 aaPredicted RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 C3orf30Q96M34 536 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 TMEM74Q96NL1 305 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 NSUN5Q96P11 429 aaKnown RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 PTDSS2Q9BVG9 487 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 SHARPINQ9H0F6 387 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 KAT8Q9H7Z6 458 aaKnown RBP11.32□□□□□ -0.6
SRRT-215ENST00000614484 ARL15Q9NXU5 204 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 CEP250Q9BV73 2442 aa11.32□□□□□ -0.6
SRRT-215ENST00000614484 EFCAB9A8MZ26 197 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 YY2O15391 372 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 STATHP02808 62 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 MPLP40238 635 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 DSG2Q14126 1118 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 UGT3A2Q3SY77 523 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.31□□□□□ -0.6
SRRT-215ENST00000614484 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
SRRT-215ENST00000614484 BMP8AQ7Z5Y6 402 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 TPRA1Q86W33 373 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 PTRH1Q86Y79 214 aaKnown RBP11.31□□□□□ -0.6
SRRT-215ENST00000614484 NRROSQ86YC3 692 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 OR2L2Q8NH16 312 aa11.31□□□□□ -0.6
SRRT-215ENST00000614484 OR10G6Q8NH81 332 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms