RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 SLC25A19Q9HC21 320 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 PRDM9Q9NQV7 894 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ZNF443Q9Y2A4 671 aaPredicted RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 LAMA1P25391 3075 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CYR61O00622 381 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 AP3D1O14617 1153 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 NTN1O95631 604 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 IFNA8P32881 189 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 SLC15A1P46059 708 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 SERPINB10P48595 397 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ALDH6A1Q02252 535 aaKnown RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 ST3GAL3Q11203 375 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 GINS1Q14691 196 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 TRAM2Q15035 370 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 GPR68Q15743 365 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ARHGAP11BQ3KRB8 267 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ZNF730Q6ZMV8 503 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 RRM2BQ7LG56 351 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 GJD3Q8N144 294 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 WDR36Q8NI36 951 aaKnown RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 C9orf43Q8TAL5 461 aaPredicted RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 DIO2Q92813 273 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 SH3YL1Q96HL8 342 aaPredicted RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ORAI3Q9BRQ5 295 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 PHF7Q9BWX1 381 aaPredicted RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 LMAN1LQ9HAT1 526 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 C19orf53Q9UNZ5 99 aaPredicted RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 NTNG1Q9Y2I2 539 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 FAM170BA6NMN3 283 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 GPR75O95800 540 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ATP1B1P05026 303 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CTSBP07858 339 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 GSTM3P21266 225 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CDH3P22223 829 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 GIPRP48546 466 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
NEK3-205ENST00000610828 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 C11orf74Q86VG3 221 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CACTIN-AS1Q8N1I8 211 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CA13Q8N1Q1 262 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 TMCO5AQ8N6Q1 288 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 NR4A3Q92570 626 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 SDF2Q99470 211 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 EGLN3Q9H6Z9 239 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 GALNT8Q9NY28 637 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 CNIH4Q9P003 139 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 POMT2Q9UKY4 750 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 IFT52Q9Y366 437 aa12.72□□□□□ -0.37
NEK3-205ENST00000610828 LOC100506127A0A0U1RQW1 187 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 PRKYO43930 277 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 RDH16O75452 317 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 RPLP0P05388 317 aaKnown RBP12.71□□□□□ -0.37
NEK3-205ENST00000610828 PIPP12273 146 aaPredicted RBP12.71□□□□□ -0.37
NEK3-205ENST00000610828 IFNGR2P38484 337 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 RGS6P49758 472 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 MAZP56270 477 aaKnown RBP12.71□□□□□ -0.37
NEK3-205ENST00000610828 TDGQ13569 410 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 GAS6Q14393 721 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 NR1D2Q14995 579 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 EXOSC7Q15024 291 aaKnown RBP12.71□□□□□ -0.37
NEK3-205ENST00000610828 TMEM201Q5SNT2 666 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 FHL5Q5TD97 284 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 ACSM5Q6NUN0 579 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 PRICKLE2Q7Z3G6 844 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.37
NEK3-205ENST00000610828 PIK3R3Q92569 461 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 FAM46AQ96IP4 442 aaKnown RBP12.71□□□□□ -0.37
NEK3-205ENST00000610828 MCHR1Q99705 422 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 DCSTAMPQ9H295 470 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 SEMA6CQ9H3T2 930 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 PIGUQ9H490 435 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 SLC2A4RGQ9NR83 387 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 PMF1-BGLAPU3KQ54 211 aa12.71□□□□□ -0.37
NEK3-205ENST00000610828 IGHV1OR15-9A0A0B4J2B8 117 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 CENPVL1A0A0U1RR11 272 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 CLDN25C9JDP6 229 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 GRK5P34947 590 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 PCYT1AP49585 367 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 ZNF91Q05481 1191 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 CCDC85BQ15834 202 aaPredicted RBP12.71□□□□□ -0.38
NEK3-205ENST00000610828 MFSD4BQ5TF39 518 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 ZNF836Q6ZNA1 936 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 KIF18BQ86Y91 864 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 NKAIN4Q8IVV8 208 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 AVL9Q8NBF6 648 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 OR9A4Q8NGU2 314 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 VMP1Q96GC9 406 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms